AMCG00020824


Basic Information

Item Value
gene id AMCG00020824
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34452211 ~ 34456901 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020824
ATGCTGGTGGTGCTGGTGACCTTCCTGGTAGGGGGGAACATATACACTATGGGCTGCCGGAACTGGCGCAACAAAGAGATCTTGCTGTTCCTTGATAATCCGAGAAACCTCCCAGAGTATCTGAACATCAGCAAACTGGGAATGAACTTCAGCATCTCTGAGGTGTACAAtgccTGTGAGGAGGGGAAATCGCTGTATTACTCCATGCACCTGGATCAGTTTGGCTTTGACTTCGAGGTTGATAAGTATGTGAGCAAACTGAACAGCATTATCTCGGGTCTGTCTGTGAATCTGACTGGAGTGAGACTGCTGTCCAAGAAGGACAAGATGAGAATCTTTTACCTGAAGAACAGCCACATTGCTCATATCAACTACACGCTCATGCGAACACAGCTGGACAAGAAAGTGGTCCAGATAGACCTGCTGGGATACGCAGACAGACTGAGCAGTGCTGCCCAGCTGCAGAATGACCCCAGCATCAGAGACAAGTTTGAAGTGGAGGCCATGAGTATCAGAGAGCTGTACAACACCACAGTGAGGCAGCAGGAAGCAGATGCAGTGACCCAGTGTGTTGTGGACCAAGCAATAAACAACCTTAAGCAGTACCTGACATGGACGAAACAAAccATCATTACGAAGGTCCTGTCCTGCCTGCCGCTGGCCGTGGCGTTGGATAACGTGTACACCACAGTGTGCGTGAACACGGTGGACCCCTGGaaCGCCTACTGGCTCTGCCTGGGCTGGTGCACCGTATTCCTCATCCCCAGTGCTATCTTCGCCGTGAGGACCGCCAAGCACTTCAGGCCCATCCTCAGGAGACCCGGTGACCCCTTTAACACGGACAATACGTTCAGAATACCCAAGGCAAAGCTGAGAAACCCTAGTGTCTACGCCAACTCCAATCAAAACAACGGCAGCAACTACAATATCAACCTAAGCCAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020824 True 945 mRNA 0.51 10 34452211 34456901

Neighbor

gene id symbol gene type direction distance location
AMCG00020825 NA coding upstream 484 34450528 ~ 34451727 (+)
AMCG00020823 NA coding upstream 2014 34445279 ~ 34450197 (+)
AMCG00020818 NA coding upstream 25362 34420834 ~ 34426849 (+)
AMCG00020816 NA coding upstream 33544 34413614 ~ 34418667 (+)
AMCG00020817 NA coding upstream 50087 34393701 ~ 34402124 (+)
AMCG00020819 LOC107597267,LOC107654641,LOC107741205,LOC105890027,LOC107663217 coding downstream 5565 34462466 ~ 34475645 (+)
AMCG00020827 NA coding downstream 24478 34481379 ~ 34493390 (+)
AMCG00020826 NA coding downstream 41385 34498286 ~ 34502202 (+)
AMCG00020835 hk2,LOC106585103 coding downstream 393761 34850662 ~ 34865362 (+)
AMCG00020840 NA coding downstream 421789 34878690 ~ 34879805 (+)
G65877 NA non-coding upstream 185111 34239889 ~ 34267100 (+)
G65873 NA non-coding upstream 190282 34222346 ~ 34261929 (+)
G65831 NA non-coding upstream 389616 34062152 ~ 34062595 (+)
G65829 NA non-coding upstream 401174 34049994 ~ 34051037 (+)
G65670 NA non-coding upstream 1570093 32879099 ~ 32882118 (+)
G65954 NA non-coding downstream 55756 34512657 ~ 34512879 (+)
G65956 NA non-coding downstream 57145 34514046 ~ 34515896 (+)
G65962 NA non-coding downstream 69966 34526867 ~ 34527075 (+)
G65978 NA non-coding downstream 220010 34676911 ~ 34732379 (+)
G65994 NA non-coding downstream 289992 34746893 ~ 34748114 (+)
AMCG00020820 NA other upstream 40591 34404534 ~ 34411620 (+)
G65830 tet3,LOC106906237 other upstream 392746 34059111 ~ 34059465 (+)
AMCG00020796 tmem230a,LOC106565272,LOC106579885 other upstream 491629 33954806 ~ 33960582 (+)
G65705 NA other upstream 1343785 33107873 ~ 33108426 (+)
G65691 NA other upstream 1462766 32946731 ~ 32989445 (+)
G66008 NA other downstream 327311 34784212 ~ 34787474 (+)
G66060 NA other downstream 510943 34967844 ~ 35008322 (+)
AMCG00020855 NA other downstream 690702 35147603 ~ 35149418 (+)
G66149 NA other downstream 706912 35163813 ~ 35164985 (+)
AMCG00020874 NA other downstream 1290255 35747156 ~ 35750446 (+)

Expression


Co-expression Network