AMCG00020830


Basic Information

Item Value
gene id AMCG00020830
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 34519200 ~ 34522321 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020830
atGAACAGTACGTGTCCTGCAGCCCCCCCTGACCTGCTGCTGCAGCCGCTCTGGGAGTCCATCCTCCGCCGGGAGCGCCTCCTCCAGTCCCCGCTGCTGCCCGCGTCCTTCGGCTTCCTGGCACACCTGGCTCTGTCGGTGCCGTTCCTGCTTGTGGACGTGCTGGGGCGCCGCTGGCCGCAGATGAACTGTTACCGGATTGCTGGCGGGGACCCGCAGGTACCAGTCGGCGACACCCTGCAGCTGTGGGGGCGCTGTCTGCTCAGGATAGCCTGCTGCCACCTGACGGTCATCGCCCCGGTCACGGCGCTGCTGCAGTGCGTCCGCAGCCCCAGTCTGCCGCCGGAGGCTCCGCGCTGCGCCAGAGCGCTGGCCGAGGTCGCCCTGTGCCTCCTGCTCTTCGACTCCGTGTACTTCGCCTGGCACGTCGTCATTCACAGGGTGCCCTGGCTGTACCAGAGAGTCCACAGCACCCACCACCAGAACCGGGACACTTTTGCTCTGGCTGCACAGGACTCCAGCCCCTGGGAACTGCTGAGCCTGCAGACCATTGCCCTCACTTGCGCCGCCCTGCTGGACTGCCACCCGCTCAGTGAAATGGCATTCCACATGATCAATATCTGGATGTCTGTGGAGGACCACTGTGGCCATGACCTGCCCTGGGCCACACACCGGCTCTTGCCCTTCCACCTCCTCGGGGGGTCGCCCTTTCACCAGACCCATCACCACCACTTCCGCTACAACTACGCACCTTACTTCACCCACTGGGACCGGCTGTGTGGTACTTATCGGGCGGATACTGCAGAGAAACCGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020830 True 816 mRNA 0.65 2 34519200 34522321

Neighbor

gene id symbol gene type direction distance location
AMCG00020822 NA coding downstream 62710 34443286 ~ 34456490 (-)
AMCG00020821 tmem150a,LOC106585116,LOC106580507 coding downstream 77472 34433425 ~ 34441728 (-)
AMCG00020815 NA coding downstream 204488 34289987 ~ 34314712 (-)
AMCG00020812 NA coding downstream 247034 34239889 ~ 34272166 (-)
AMCG00020813 NA coding downstream 298520 34216896 ~ 34220680 (-)
AMCG00020829 LOC106531303,LOC108443303,LOC103397456,LOC105014365 coding upstream 7462 34529783 ~ 34553326 (-)
AMCG00020828 NA coding upstream 47291 34569612 ~ 34573502 (-)
AMCG00020832 NA coding upstream 197383 34719704 ~ 34728364 (-)
AMCG00020834 LOC105015180,LOC106568058 coding upstream 206806 34729127 ~ 34741671 (-)
AMCG00020833 NA coding upstream 229058 34751379 ~ 34755314 (-)
G65957 NA non-coding downstream 3302 34514368 ~ 34515898 (-)
G65915 NA non-coding downstream 99010 34416657 ~ 34420190 (-)
G65872 NA non-coding downstream 299190 34218759 ~ 34220010 (-)
G65867 NA non-coding downstream 303641 34215057 ~ 34215559 (-)
G65858 NA non-coding downstream 402257 34116606 ~ 34116943 (-)
G66001 NA non-coding upstream 224620 34746941 ~ 34747361 (-)
G66003 NA non-coding upstream 226806 34749127 ~ 34749329 (-)
G66004 NA non-coding upstream 227123 34749444 ~ 34750150 (-)
G66087 NA non-coding upstream 376463 34898784 ~ 34942966 (-)
G66123 NA non-coding upstream 481257 35003578 ~ 35077562 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 279503 34222315 ~ 34239697 (-)
G65756 NA other downstream 1150095 33368625 ~ 33369105 (-)
G65679 NA other downstream 1627707 32886364 ~ 32891493 (-)
G65641 NA other downstream 1862181 32655134 ~ 32657019 (-)
AMCG00020774 snrpg other downstream 1908492 32607862 ~ 32610708 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other upstream 286283 34808604 ~ 34814294 (-)
AMCG00020837 NA other upstream 316440 34838761 ~ 34841323 (-)
G66054 NA other upstream 340298 34862619 ~ 34865305 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 627247 35149568 ~ 35170179 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 822385 35344706 ~ 35349499 (-)

Expression


Co-expression Network