AMCG00020852


Basic Information

Item Value
gene id AMCG00020852
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35124415 ~ 35127755 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020852
atgGGGTATGAAATTACCTCAGGGCTATGGGAGTCCCTGCCGCTGTCTTGCACAGCAGCTCCCAGGACCCTTTCTGCACAGTGTTTGGAGTTCAAAGACTGCAATGATAAACGCACTGTCATTATCCCTGATATTGCCAATATAGGCGTGCGGCACTACAAACACCTCAGCATCCCGGTGACCAGGGCAGAGGCACGTGCCATTGAGCGGATTGTCAAAGAGGCAGTCCTTGCTGTCCTGCCGGGGGTGCAGCTCACTCTCACTGGAGGGTTCAGAAGAGGGAAACAGACAGGCCACGATGTGGACTTCCTCATCACGCACCCCGAGGAGGGCAAGGAGGAAGGGCTTCTGCCCAAAGTCATCAGCTGGTTGGAAAGCCAGgacCTCCTGCTATACAATAAGATGAACGAGAACTCGTATGGGGAGGCGAAGGAGCTGCACAGCCGCCCCGTGAGCAGCATGGATCGCTTTGAGAGGTGCTTCTCCATCTTCAGGCTGGACCAGCCTGCCTCCGGGACACAGCAGCCTGGGGCCTCGAGTGCCGGGGAGGCCCAGGGAAGTGCACCTCTCGGGGGGCAGGGTGCATGCGAGCCCCGGGGCTGGAAGGCCGTGCGTGTGGACCTGGTGGTGACGCCCATCAGTCAGTTTGCATTCGCCCTGCTAGGCTGGACTGGGTCACAGAAAAAGTTCCTGCCTGCCAGCTCAGAAGAGGAGATTTTCACCCATTTAGGACTGGACTATATCCCTCCATCTGAGAGGAACGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020852 True 768 mRNA 0.58 5 35124415 35127755

Neighbor

gene id symbol gene type direction distance location
AMCG00020851 NA coding downstream 12990 35101007 ~ 35111425 (-)
AMCG00020854 NA coding downstream 24458 35085817 ~ 35099957 (-)
AMCG00020849 NA coding downstream 100603 35009891 ~ 35023812 (-)
AMCG00020845 mrps24,LOC102797859,LOC106562909 coding downstream 232710 34890247 ~ 34891705 (-)
AMCG00020838 NA coding downstream 297786 34818213 ~ 34826629 (-)
AMCG00020860 NA coding upstream 61765 35189520 ~ 35197646 (-)
AMCG00020861 NA coding upstream 107996 35235751 ~ 35238599 (-)
AMCG00020862 NA coding upstream 126039 35253794 ~ 35256200 (-)
AMCG00020866 NA coding upstream 172630 35300385 ~ 35310071 (-)
AMCG00020865 NA coding upstream 233704 35361459 ~ 35372256 (-)
G66126 ppia,LOC108241540,LOC100699155 non-coding downstream 28762 35079678 ~ 35095653 (-)
G66123 NA non-coding downstream 46853 35003578 ~ 35077562 (-)
G66087 NA non-coding downstream 181449 34898784 ~ 34942966 (-)
G66004 NA non-coding downstream 374265 34749444 ~ 34750150 (-)
G66003 NA non-coding downstream 375086 34749127 ~ 34749329 (-)
G66154 NA non-coding upstream 7223 35134978 ~ 35135563 (-)
G66181 NA non-coding upstream 124647 35252402 ~ 35252669 (-)
G66228 NA non-coding upstream 301429 35429184 ~ 35429394 (-)
G66232 NA non-coding upstream 305523 35433278 ~ 35433565 (-)
G66259 NA non-coding upstream 308535 35436290 ~ 35502312 (-)
G66054 NA other downstream 259110 34862619 ~ 34865305 (-)
AMCG00020837 NA other downstream 283092 34838761 ~ 34841323 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other downstream 310121 34808604 ~ 34814294 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 884718 34222315 ~ 34239697 (-)
G65756 NA other downstream 1755310 33368625 ~ 33369105 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 21813 35149568 ~ 35170179 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 216951 35344706 ~ 35349499 (-)
G66279 NA other upstream 523225 35650980 ~ 35692460 (-)
AMCG00020876 NA other upstream 567213 35694968 ~ 35696969 (-)
AMCG00020887 tmem127 other upstream 686118 35813873 ~ 35819830 (-)

Expression


Co-expression Network