AMCG00020854


Basic Information

Item Value
gene id AMCG00020854
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35085817 ~ 35099957 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020854
ATGCAGCTTCCGTGTTCTATGACTATCTCCCTCTTCATTAATTCTCAGGTTTCTGTTTTCATCCAGGACAAGAGCCTCATTGTGCGCCAGTCCCCCCCCACCAGTCACAGCACGCAGTGGGCTGCTCTATTCTGTGCTGcCCAGCAAACCGAGTCACACAGCGCCACTTCTGTAAACGAGGAGCCGGGATTCATATCTTATCTGCGCTCAGCCAAACCGAAAGTGCAGCAGAGTTTCTTCAGCAAGTTAAAAAACACGCATATTCCTCCCCCAGCCCCGCCCAGAAGGATAGATAACGGCGCAGCCTACGGGTGGTCCGTCGATGGCTGCGATGAGGACGGAGACACCTACGAGGCCCCCCCCTGTGAGCGCCCCGCCATGAAGGTGTTCCCCGGACAGGTGGAGGAGAATAAGCCTGAGCCGCAGGAGGATGCAGATGACACATACATTGACCCCAGCCCCAACAACCCCCCTCAGGTGAACCGTAAGGACAAGCCAGGAAAGAAGACTCCCCCAAAACAGATCCTTCCCCCTCGGCCTGCGCAGGGCTCAGCCTCGCTGCCAGAGGAAGATGTGTACCTGGACCCCAACGAAGGCCAGGATGACGAACTGTACCTGGAGCCGAACCCCGGACGAAGCCCCCTATTCCCAGAGCCAAGTCAGGAAGCCAGAAGGACGTCTTTCCCAATCAAGGTGCCCTCCCTGACGTCAACAGCCAAGCCCCCCCTGCCCTCCCAACTCAAAGAGCCCAAGCCCAGCCCTCCAATCCCCAGAGCCCTGGCGGACAGTCCCGGAGCCAATCACACACCGCCCAGGTCGTCCTTCCTGTCAGGGCCAGAGGAGGCCAACCTGCAGGGCAAGGAGTGGTTTGCAGGAAGCTGTGATCGCAAAACTGCAGAAGCAGTGCTCCACAAAGTCAAAAAGGACGGGGCGTTCCTGGTCAGGCTGAGCTCGGCCCAGACGGGTCGGCAGCCCTACACCCTGGTGGTGCTGTACCAGGGGAAGGTCTACAACATTCCTGTGCGCTACCTGGAGGACAGCCGCCGCTACGCACTGGGCAAGGAGGGCAAGAGGAGTGAGGAGttCTTTGAGACTCTCTCGGACATCATCTCCCACCACACGAAGAACCCCCTCCTACTGATTGACATTATTCTGATATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020854 True 1161 mRNA 0.58 18 35085817 35099957

Neighbor

gene id symbol gene type direction distance location
AMCG00020849 NA coding downstream 62005 35009891 ~ 35023812 (-)
AMCG00020845 mrps24,LOC102797859,LOC106562909 coding downstream 194112 34890247 ~ 34891705 (-)
AMCG00020838 NA coding downstream 259188 34818213 ~ 34826629 (-)
AMCG00020839 mxd1 coding downstream 294761 34787271 ~ 34791056 (-)
AMCG00020831 LOC102225713 coding downstream 315175 34763193 ~ 34770642 (-)
AMCG00020851 NA coding upstream 1050 35101007 ~ 35111425 (-)
AMCG00020852 NA coding upstream 24458 35124415 ~ 35127755 (-)
AMCG00020860 NA coding upstream 89563 35189520 ~ 35197646 (-)
AMCG00020861 NA coding upstream 135794 35235751 ~ 35238599 (-)
AMCG00020862 NA coding upstream 153837 35253794 ~ 35256200 (-)
G66123 NA non-coding downstream 8255 35003578 ~ 35077562 (-)
G66087 NA non-coding downstream 142851 34898784 ~ 34942966 (-)
G66004 NA non-coding downstream 335667 34749444 ~ 34750150 (-)
G66003 NA non-coding downstream 336488 34749127 ~ 34749329 (-)
G66001 NA non-coding downstream 338456 34746941 ~ 34747361 (-)
G66154 NA non-coding upstream 35021 35134978 ~ 35135563 (-)
G66181 NA non-coding upstream 152445 35252402 ~ 35252669 (-)
G66228 NA non-coding upstream 329227 35429184 ~ 35429394 (-)
G66232 NA non-coding upstream 333321 35433278 ~ 35433565 (-)
G66259 NA non-coding upstream 336333 35436290 ~ 35502312 (-)
G66054 NA other downstream 220512 34862619 ~ 34865305 (-)
AMCG00020837 NA other downstream 244494 34838761 ~ 34841323 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other downstream 271523 34808604 ~ 34814294 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 846120 34222315 ~ 34239697 (-)
G65756 NA other downstream 1716712 33368625 ~ 33369105 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other upstream 49611 35149568 ~ 35170179 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 244749 35344706 ~ 35349499 (-)
G66279 NA other upstream 551023 35650980 ~ 35692460 (-)
AMCG00020876 NA other upstream 595011 35694968 ~ 35696969 (-)
AMCG00020887 tmem127 other upstream 713916 35813873 ~ 35819830 (-)

Expression


Co-expression Network