AMCG00020856


Basic Information

Item Value
gene id AMCG00020856
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35158674 ~ 35161096 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020856
ATGAAGGGACACTTTTCCATCGAGTGGCTGTCCCAGAGCAGTCAGAAGACCGGGCCGGAGCCCAGAGACACGGCCTTGCCTGGACCCTGCACCTCCAGCACCGCCCCCGAGAGCCTGCCCGGGTTCTACAGCAGCTGGGGGGTGCCACATCCAGGTCCTCGGAGGCTACCGGGAATCGCCCCACACTCGGCCCAGGGGAGCCCCTCGGTCTCACTGCAGCCAGAGCTCAACCCAGCTGGCAGGCCTGATCTCAGCCACAGAACCAGCGCCCATGCACTAGAAGCAGGTTTCAGCAGCGGCgcagaggaagaggaaacaTCAGGATACGAGAGCGAAGGGGGCCGATCTGCATCATCAGCTGCCCAGCAGGGTGATACCGGAggccccccctccccatcaccttcctccgcctcctcctcttcGTCCCCCAGCCCCCCCGGACGCCGCCCCCGGACGGCCTTCACTGCCGAGCAGATCAGCCGCCTGGAGCGCACCTTCAAGAAGCACGCATACCTGGGCACACGTGAAAAGGAGGAGCTCTGCCGCAAACTCAACCTGTCCGAGAAGCAGCTGCTGCACTACCCCGAGCTCCAGGCTTTCGGGCCTACCGCCCCTTACTCCGGCTACTACCCTGGCCAGGACTGCCCGGCCACGTACCCAGCGCCTCCCGGCCTACCTTatgccccctcccccctggCGATGGAGACGCCGCTCTACCCCTACAGTGTGGCCCCCATGTTCCTGCCACCCGGGGGTACAGGAGCCACCATCCTGCCCAGGTACCACCCGTACAGCCCGCGCTATTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020856 True 807 mRNA 0.66 3 35158674 35161096

Neighbor

gene id symbol gene type direction distance location
AMCG00020858 NA coding upstream 11132 35146077 ~ 35147542 (+)
AMCG00020850 NA coding upstream 38513 35113159 ~ 35120161 (+)
AMCG00020848 NA coding upstream 76291 35077401 ~ 35082383 (+)
AMCG00020847 zmiz2,LOC107588944,LOC107698211 coding upstream 82254 35056144 ~ 35076420 (+)
AMCG00020846 ogdha,LOC108411168,LOC107691557,LOC107756845 coding upstream 153176 34977924 ~ 35005498 (+)
AMCG00020857 purb,LOC104936618 coding downstream 9956 35171052 ~ 35172101 (+)
AMCG00020859 NA coding downstream 11930 35173026 ~ 35175613 (+)
AMCG00020864 NA coding downstream 116764 35277860 ~ 35287818 (+)
AMCG00020863 LOC102779543,LOC108260282,LOC102217523,LOC106917416,LOC103149690,LOC106950839,LOC103473804,LOC101061943 coding downstream 193610 35354706 ~ 35356516 (+)
AMCG00020868 NA coding downstream 215174 35376270 ~ 35401524 (+)
G66072 NA non-coding upstream 132445 35025003 ~ 35026229 (+)
G65995 NA non-coding upstream 408523 34749498 ~ 34750151 (+)
G65996 NA non-coding upstream 409331 34749127 ~ 34749343 (+)
G65994 NA non-coding upstream 410560 34746893 ~ 34748114 (+)
G65978 NA non-coding upstream 426295 34676911 ~ 34732379 (+)
G66151 NA non-coding downstream 5972 35167068 ~ 35170275 (+)
G66231 NA non-coding downstream 272172 35433268 ~ 35433558 (+)
G66258 NA non-coding downstream 391807 35552903 ~ 35553230 (+)
G66290 NA non-coding downstream 554949 35716045 ~ 35716249 (+)
G66319 NA non-coding downstream 597012 35758108 ~ 35761032 (+)
AMCG00020855 NA other upstream 9256 35147603 ~ 35149418 (+)
G66060 NA other upstream 150352 34967844 ~ 35008322 (+)
G66008 NA other upstream 371200 34784212 ~ 34787474 (+)
AMCG00020820 NA other upstream 747054 34404534 ~ 34411620 (+)
G65830 tet3,LOC106906237 other upstream 1099209 34059111 ~ 34059465 (+)
G66149 NA other downstream 2717 35163813 ~ 35164985 (+)
AMCG00020874 NA other downstream 586060 35747156 ~ 35750446 (+)
G66362 NA other downstream 706297 35867393 ~ 35908402 (+)
G66506 NA other downstream 1093603 36254699 ~ 36256511 (+)
G66551 NA other downstream 1753719 36914815 ~ 36917436 (+)

Expression


Co-expression Network