AMCG00020861


Basic Information

Item Value
gene id AMCG00020861
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35235751 ~ 35238599 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020861
ATGGCTCAGCCCAAAATGACTCCAGCAAGGTCTGCAGTACTGGGGAACCCAGCCAGGACGGCAGGGAACAAGGTTCAGGCAAACAGCGCCCAGGCTAAACCACTTGTGTGTCCAGGCCCTGCTAAGGCTGCTCCCAAGAGACCACTCCAGACACGGCCTACCCTCATGGGTCCTGGGGTTCAGTCCTCCAGAGTAGGGACCCAGACCCAAGCCCCTGCAGATCCTCTGGGCCTCCCTGCTGCCCCCCGGGCAAGGAGCATGAGGGGGACTGGGTTGAATGAGGTCCAAAGGCAGCATTGTGCTCTGAAGAGAGCTCTGGGACTGGCTTCGGCTGTGCTGGGGGTAGAGGCCCAGCATGTTGGAGCTGCGACTCGGGTCAGCCACAGTGTGGGGGGAGCAGGGAATCACAGCTGCCCTGCTGGAGAAAGAGCAAGCACTGGAGCGGGGCAGGGCAAACGTGGTAATACTGCTGGGTTAAAAGAGCAGCAGAGGGGTCAGGGGAGCAGCACCAGTGCCTCCAAGAGACCGAGCCGCAACTCCTGTTTCCAAGCTGAGCCAGGGCAGCCAGGGGTGGCAGCAGGGAGGCCGACACGAGAGCGCAAGAGCACGGGGCCGCCCTGGCAGTGCAGAGCAGCCAGCTTGGCCGGTACGGCAGCAGAGGCCAGGCCCAAACCCCACCCTACCACTATGGCCCTGGCCCACACCAGACCCGGGAGTCAGGGCCCAGCTGTGAGGACCATGTCCACGGAGCCTGCAAGGATTAACGGTGGCAGGACTGGCACTCACAGTAGCAGCGGAGAGCAGGGTACAGTGCGTCCCGAGAAGACATTCAGTAATGCGCAGGAGGAAAGGATGCGGAAGCTGCAGGAGTGGCGCGAGTCGAGGGGCATCTCGTACAAGCGCCCGCCCATGCCCACCCCCAGGAAGTCGGCAAAGAAGAAGAAGCCGCCAGCCCCACGCCAGTCCTTCTGGAGTGCCATCGAGGAGGAGGACCAGGTCAACAGCCTGGTGACAAGTGTGGAGGCCACGCTGGCCGACTGCCTGAAGCTGCTGGAGGAGgGCTTTCCCTCCCAGGAGGTGTCCACTCTGCTGTCTCGGGTGCCCATGGCCCAGAGGTTTGCCCGGTACTGGATCTGCCGGGTGCGACTGATGGAGCGAGCCGGAGACTACGAGGTGCTCCCGCTGTTCGAGGAGGCTGTGCGGGTGGTGCTGGAG

Function

GO: NA

KEGG:

id description
K16769 CKAP2; cytoskeleton-associated protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020861 True 1215 mRNA 0.63 3 35235751 35238599

Neighbor

gene id symbol gene type direction distance location
AMCG00020860 NA coding downstream 38105 35189520 ~ 35197646 (-)
AMCG00020852 NA coding downstream 107996 35124415 ~ 35127755 (-)
AMCG00020851 NA coding downstream 124326 35101007 ~ 35111425 (-)
AMCG00020854 NA coding downstream 135794 35085817 ~ 35099957 (-)
AMCG00020849 NA coding downstream 211939 35009891 ~ 35023812 (-)
AMCG00020862 NA coding upstream 15195 35253794 ~ 35256200 (-)
AMCG00020866 NA coding upstream 61786 35300385 ~ 35310071 (-)
AMCG00020865 NA coding upstream 122860 35361459 ~ 35372256 (-)
AMCG00020871 LOC104941581 coding upstream 201430 35440029 ~ 35445018 (-)
AMCG00020870 LOC102300863 coding upstream 208255 35446854 ~ 35485425 (-)
G66154 NA non-coding downstream 100188 35134978 ~ 35135563 (-)
G66126 ppia,LOC108241540,LOC100699155 non-coding downstream 140098 35079678 ~ 35095653 (-)
G66123 NA non-coding downstream 158189 35003578 ~ 35077562 (-)
G66087 NA non-coding downstream 292785 34898784 ~ 34942966 (-)
G66004 NA non-coding downstream 485601 34749444 ~ 34750150 (-)
G66181 NA non-coding upstream 13803 35252402 ~ 35252669 (-)
G66228 NA non-coding upstream 190585 35429184 ~ 35429394 (-)
G66232 NA non-coding upstream 194679 35433278 ~ 35433565 (-)
G66259 NA non-coding upstream 197691 35436290 ~ 35502312 (-)
G66284 NA non-coding upstream 464164 35702763 ~ 35703073 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other downstream 65572 35149568 ~ 35170179 (-)
G66054 NA other downstream 370446 34862619 ~ 34865305 (-)
AMCG00020837 NA other downstream 394428 34838761 ~ 34841323 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other downstream 421457 34808604 ~ 34814294 (-)
AMCG00020810 LOC103363194,LOC101160416,LOC107087288,LOC101481896,LOC107739988,LOC102234237,LOC107675956 other downstream 996054 34222315 ~ 34239697 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other upstream 106107 35344706 ~ 35349499 (-)
G66279 NA other upstream 412381 35650980 ~ 35692460 (-)
AMCG00020876 NA other upstream 456369 35694968 ~ 35696969 (-)
AMCG00020887 tmem127 other upstream 575274 35813873 ~ 35819830 (-)
AMCG00020900 NA other upstream 737165 35975764 ~ 35986712 (-)

Expression


Co-expression Network