AMCG00020864


Basic Information

Item Value
gene id AMCG00020864
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35277860 ~ 35287818 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020864
ATGGACGAGGACCAGGGCTTTGCCGGGGACTGCTCCCAGGTCTGTCTGGACTCTCAGCAGCCTGAGGACTCTGCTGGAGAGACCCTGTGTCCCTCCCTGGAGCTGCTGGCACTCGACGGGGACCTGGAGGCCAAACTGCGGGGAGATGACAGGGGGGAGAAGttagaagaggaggaggagggatgggGGGTGGATGCTTTGGGGAACGGGGCCACGGCGGGATCGGGAGAGTCAGGAGAATCAGACATGGAGGATGTTCCCTTTGAGGAGCTGGAGTGTGGCTGCGAGATGGGGGAGGTGGCCGGGCTGCAGGGCCTGGGAGACTCGGGGATGGGAGACCCAGGCAGTGGCAGTGGCCCGGACCCCAGCACCCCTGCCTCCTTCTGCTCCCGCACAGAGAACAGCTCCAGTGACGAACTGGACCAGTCCAGCGGGGCAGCCAGCCTGGGAGATGACCTTGAGATGCAGTGGACTGAAAATCCCTTGTCCCAGGACaacccaccccctcctcccaccCCAGGGCAGGAGCTGCAGGCCTTGGGGCAGGACGGGGACTCGGGAAAGGGGGTGACCTCCTTATCTGGGTGGGTCCCGGGGGCCCACAGAGGTCTGGAGTCCCTGCCAGAGGTGGCCAGGTCTGACAGGATCCAGGAGGCGGGGCAGCGGTTGGACAGTCCTGAGGAGACAGAGCGCACTGACCCCCCGTCTGCCTCCGCTCTCCTGGGCCCGGCCCATGGGGAGATTGACCAGGACGAGGGTAATGAGCCTAACGAGCCTAACGAGGAGCCTGTGCCTGTCAGCTCCGATGGCTGTCAACCTGAGGGAGGGATAATTGAGGAGTGTCCTTCCCCATTAGAGTCTGAAGAAAACACAGAGGCAGAGTACGTAGCTCCACCCACAGAAGCTCTGCTCCACGAATTGAGCGAGGCTGCCACCTTGCTCTCATCGGAGGAGGCCGAAAATCCCACTCAAGGTCCGGATCTGGGGGAGGAGCCAGAACCTGCAGGAGCCTGCGAAGGCACAGGGATCGCAGACTGTGTAGACGGTGCAGATTCTGCTGGGGGCACAGGGTCCATGGGGGCTACAAAATCTCTAGGAACTAAAGCCGGCATGGGAGTCCCAGACTCAGAGGCCGCCGGGTCCCTCGGGAGCTCGAACAAAGAGCTCAAGCAGCAAGAGGAGGGGCAGCAGCAGGAGGTAGCAACGGCGGCAGACGGTGATGGCTCAGAAGAGGACAGTGAAGTGGAGGGGGTGGTTCCAGCAGCTGGAACACAACAGGCTGGGGCTCTGAGGGACAGAGAGTCCAAGCAAGAGGAGGCAGAGgcaggagaggaaggggagaaagaAGAGACagcagaaggagaggaagggaaggaaggagagaaggCAGAGGAAGGACAGGAGGAAGAGCAGGCACCTGCTAGAATGGGCTGTGAGGAAGAACAGCAGGACCAGCCAGAGAGTGACCTGCAGACAGTGGAGAAGCCCAGGGGCCCCGGCGGCCCCCAGCTAAACGGCAGCCATGTGGACAGAGAGGCAGCGCGCAGACTGGCCGAGCGGCTCTACAGATTGGAGGACTTCCGGCGAACAGATGTAGTGAAACACCTGGACAAAGACAATGAGTTCAGCAGTGCCGTTGGCGAGGAGTACCTGAAGCTTTTTGATTTCTCTGGGCAGAATCTCGACCAGGCGCTGAGGTCCTTCCTGAAGGTGGTGGTTCTGATCGGAGAGACGCAGGAGAGGGAGCGTGTGTTGCAGCACTTCGCACAGCGCTTCCATCAATGCAACCCTCACAGCTTTCAGTCCTCAGGCGCGGTGCTCAGTCTGACCTGTGCCAACTTGGGTAAAGCCATGACCGTCTCAAGCTTTGTTTCCAATTTGGAAGGGATGAATGAGGGACAGAGCTTCCCCAAGGACCTGCTGAAGGGTCTGTACCACGGCATCAAGAGCGAGCCGCTGGAGTGGGCAGTTGGCGAGGAGGAACTGAAGGGCTCGCTGATGTTGCCAGGGGACTGCGCTGTGGATGCACCACTCCGCTCCAAGTGCAACCCCTTCCAGGACATTCCCCACGACGCGAAGGCCACCGTCTCCCTGGGGGAAGAGAAGCTGGAAGACATTCTACGCGGTGCTGAAGGGCATGGTGCTGACGAGTACCGAATGGACTGGCAGAGCTCAGAGGAGGTGGTGAGTGTCCACCACGCGCTGGCTGAGAGGGCCGCCGACTACACCAAGAAGCAGCATGTGTTCCGCCTGCAGACCGCAGACTGGAGAGTCTTCCTCTTCCAGGCCTCGAAGTTCACCAGACCCATCCTGCCGGCCACCCAGTCCCGGCACTCCACGCTGCTGGGCGCGTGGCGGCGCCtgggcaccacagacctggaCCTCTTCGACAGCGATGTGTGTGACGCCGTGGAGACGGACGGGGAGGAGCTGAAGAAGTCCCACTCCAGCCCCTCCCTCAACCTGGACTTGCCCACGCCCATCGTCAAGGTGAAGCGCAACATCTCTGAGAGACGCACCTACCGCAAGATCATTGTGCCGCGCCGCCGCAGCAGGGAGCTGaCAAACAAGCTTTACTTCATCTTCTCGCTCTTTCTCGCCAAGTCTCGCAACACTTTGGCCAACCCCCCTGCACTTCCCCGGGGAGGCTGGAGAGCCACAGCAACAGGGGTGAGGGAGACAGGGCCTTGA

Function

GO: NA

KEGG:

id description
K12494 PSD; PH and SEC7 domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020864 True 2691 mRNA 0.61 15 35277860 35287818

Neighbor

gene id symbol gene type direction distance location
AMCG00020859 NA coding upstream 102247 35173026 ~ 35175613 (+)
AMCG00020857 purb,LOC104936618 coding upstream 105759 35171052 ~ 35172101 (+)
AMCG00020856 NA coding upstream 116764 35158674 ~ 35161096 (+)
AMCG00020858 NA coding upstream 130318 35146077 ~ 35147542 (+)
AMCG00020850 NA coding upstream 157699 35113159 ~ 35120161 (+)
AMCG00020863 LOC102779543,LOC108260282,LOC102217523,LOC106917416,LOC103149690,LOC106950839,LOC103473804,LOC101061943 coding downstream 66888 35354706 ~ 35356516 (+)
AMCG00020868 NA coding downstream 88452 35376270 ~ 35401524 (+)
AMCG00020869 NA coding downstream 117325 35405143 ~ 35412795 (+)
AMCG00020872 NA coding downstream 128234 35416052 ~ 35416845 (+)
AMCG00020875 NA coding downstream 439934 35727752 ~ 35736989 (+)
G66151 NA non-coding upstream 107585 35167068 ~ 35170275 (+)
G66072 NA non-coding upstream 251631 35025003 ~ 35026229 (+)
G65995 NA non-coding upstream 527709 34749498 ~ 34750151 (+)
G65996 NA non-coding upstream 528517 34749127 ~ 34749343 (+)
G65994 NA non-coding upstream 529746 34746893 ~ 34748114 (+)
G66231 NA non-coding downstream 145450 35433268 ~ 35433558 (+)
G66258 NA non-coding downstream 265085 35552903 ~ 35553230 (+)
G66290 NA non-coding downstream 428227 35716045 ~ 35716249 (+)
G66319 NA non-coding downstream 470290 35758108 ~ 35761032 (+)
G66325 NA non-coding downstream 480423 35768241 ~ 35768571 (+)
G66149 NA other upstream 112875 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 128442 35147603 ~ 35149418 (+)
G66060 NA other upstream 269538 34967844 ~ 35008322 (+)
G66008 NA other upstream 490386 34784212 ~ 34787474 (+)
AMCG00020820 NA other upstream 866240 34404534 ~ 34411620 (+)
AMCG00020874 NA other downstream 459338 35747156 ~ 35750446 (+)
G66362 NA other downstream 579575 35867393 ~ 35908402 (+)
G66506 NA other downstream 966881 36254699 ~ 36256511 (+)
G66551 NA other downstream 1626997 36914815 ~ 36917436 (+)
AMCG00020942 NA other downstream 2279218 37567036 ~ 37575856 (+)

Expression


Co-expression Network