AMCG00020868


Basic Information

Item Value
gene id AMCG00020868
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35376270 ~ 35401524 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020868
ATGGCGACAGGCTGGAGTGGGCAGGGGTATATGCTAACTTTGGTCGTTTTTCTCTGGAGCGCAGCAGCTGGACGAGCACAGACAGCGGCGACGGGGGTCATCAACAGCCGGATCTTGGGGATGCGGCTGGAGACGAGCAGCAAGCCGGCCATCACGACCGATAAGGGGATCATCCAGGTAACGGAGGAGAGCAACGTAGAGCTCAGGTTTTACGGGTTACAGATGCAGCCGGGCACCTGGTCAATCATCAGGTTTACGGAGCACGGAGACGAGGGCGAGGACAGCGACAGCAACTTTAACAGGACTTGCTCCGATTTCACCAAGGACTTCACCATCCGCAATCACATGAATGTCAGCAACCAGGGCACCTCGGGGGTGATCCGCATGAGCATAAAGCCCCTGCGCAAGAGCGAGCCGTTCAAGGAGTACGGCTTGTGCGTGAAGCACAGCCCGGAAGGCAAGTGGTACCTGCTGGGGGAGAAGGATGGCAGGCTGCGGGTGGTGGAGGAGAAGAAGTCGATGCTGCCCATGTGGCTGCAGGTCATTCTGATCGCCCTGCTGCTGGCGCTGTCCGGCATGTTCAGCGGGCTCAACCTGGGTCTGATGGCGCTGGACCCCATGGAGCTGCGCATCGTGCAGAGCTGCGGCACCGAGAAGGAGAAGAAGTACGCACGCAAGATCGAGCCCATCCGAAGGAAAGGCAACTACCTGCTGTGCTCGCTTCTGCTGGGCAACGTGTTGGTCAATACCACCCTCACCATCCTGCTGGACGACCTGATCGGCTCCGGACTGGGCGCCGTGGTGGCCTCCACCATCGGCATCGTCATCTTCGGGGAGATTGTGCCCCAGGCGCTGTGCTCTCGCCACGGCTTGGCGGTGGGCGCAAACACCATTGTGCTGACCAAGTTCTTCATGCTGGTGACCCTCCCGCTGTCCCTCCCCATCAGCAAGCTGCTGGACTGCGTGCTGGGCCAGGAGATCGGCACCGTCTACAACCGGGAGAAGCTGGTGGAGATGCTGAAGGTGACCGAGCCTTACAACGACCTGGTCAAGGAGGAGCTCAACATGATCCAGGGCGCGCTGGAGCTGCGCACCAAGACCGTGGAGGACGTCATGACGCCGCTGAGCAACTGCTTCATGATCCACAGCGACGCCGTGTTGGACTTCAACACCATGTCGGAGATCATGGAGAGCGGCTACACACGCATCCCCGTCTTCGAGGACGAGCGCTCCAACATCGTGGACATCCTGTACGTCAAGGACCTGGCCTTCGTGGACCCGGACGACTGCACCACGCTGAAGACCATCACCAAGTTCTACAACCACCCCGTGCACTTCGTCTTCCACGACACCAAGCTGGACTCCATGCTCGAGGAGTTCAAGAAAGGTAAGTCCCACCTGGCCATCGTGCAGAAGGTGAACAACGAGGGGGAGGGAGACCCGTTCTATGAGGTGCTGGGGCTCGTCACGCTGGAGGACGTCATTGAGGAGATCATCAAGTCTGAGATCCTGGACGAGTCGGACATGTACACTGACAATCGCACACGGATCAAAGTGGCTCCGAACAAGAACAAGCGGGATTTCTCCGCCTTCAAACAGGAGAGCGAATCAAAGGTCAAGATCTCGCCCCAGCTGCTGCTGGCAGCCCACCGCTTCCTAGCAACAGAGGTGAATCTGTTCTGCCCGACCCAGGTGTCAGAGAAGGTGTTGCTGAGGATCCTGAAGCACCCGGATGTCATCCAGGACGTCAAGTTCAACGACAGCGACAAGCGGGCTGCCCAGCACTTCCTGTACCAGCGCGGCAAGCCGGTTGACTACTTCATCCTCATTCTGCAGGGCCGGGTGGAAGTGGAGGCTGGCAACGAAAACATGAAGTTTGAGACAGGACCGTTCTCCTTCTATGGGGTGATGGCGCTCACCTCCCCGTCCATAGAGTTCCGCTCCCCGTCTCACCTCAGTGGGCTCAACCGCTCGGTGTCTCTGAACTGCACCGAGCGCTCCGACTCCCTGTCCGTCAGCGGCAGCAACAGCCAGCTCAACAGCGCCCTCCCGCCGCAGTACATCCCTGACTTCTACGTCCGCGCGCTCACCGACGTGCAGTACGTCAAGATCACTCGCTCCCAGTATCAGAACGGCCTGGTGGCGTCCCGACTAGACAGCACGCCCCAGTCTCCAGAGAGCGGACACACCCGGCTGGAGATGCCCGAGGCGCCGGCCGCCCCAGAACCCACGGAGAATGGCCCCGACGAGACCACCAGCCTCCTGAACGAGCAGAACTGCGTGCCCCGCCACTCCAACCACAGCACTCACACCGAGAGCACCATATGACCCCCGCCAGCCCTCCCGCACCCTTGACGCATGCAGGCGGGGCGGGGGGGCCACCACGGACtcctctttcacacacacacacacacacacacacacacacatacacacacgcacactgacacactgtcggGCGCCTTGTCGCCCACTTCCTCCGTCCTTGCCCTGTTTTTGCACATGTGGCACACCCCTCTCAGTGCATTGTGAAGACTTGCTCTCTAAGAGAATGGCCACGGACATCACTCCCGCCCATAACTGTCTGCTAATACAATCACTGTGAGTACTGATtaaccctcctcctcctctgcacTCCTTGCACCCCCAGCCCTCTCAAACTCTCACTCACACGGGGAGGCAGATGATGAAAACAACTCTCCCTCAAAGGTCCCTTCCCCTCCCACtgcacgctctctctctctctctctctctctctctctctcgttccctgtctcgctctccctcttcctctctctccctgtctctgtctctctcttgtcGCTCACTGCAGACCCGGCCGATTCAGATTAATGGAAGGTGGAGTGTCCTTTGGATCATGTTACCCTGCTCTGGTACGGGGGGTTCCCTGGCCGAGTGGTGGACTGCTCTTCCTGGAAGGGGTGGGTGGCGCGCCCCCTCTAACCGGTTCTTGCACGTGGTCTGTCCTGAGGTTCAATCATCCAATCAGCACTGTGTCCTTCCCTGCACGGAACTTAATTTGTCTATAGTGGAAGAGGGCAGAGGGCACAGCAGGAAGACACTCCAACGTCTGTATACGGATACAGTGACTTTCAGGGTCTGCAGACAGGAGTTCTCTGTGAAGACCCTGTTCCTCTGCTAATATCAGAGGGGCTTCTTATGTGTTTGTTAGCCAAACACATCCCTATTGGACATTGTTACcagtgtgtatgcgtgtgcgcatgtgtgtgtaagGTCAAACTCTTATGTCaggtctgttttatttattttgttctgtcttGGACCTAGGAGCAGCAGACCTAGGGGAACACAGTGGGGGTCAGGGGTCGACGTGTGAGGGCGTGGCTTCAGGGTTCCTAGGCTGGGTAGGGGGGTTCACCCTTCAGTTTTGTAGGCTGCATGactattatttaatgttttaaacttgTATAAATCATAAGGCAGAAAACTTGGACCACTGGGGAAACAATCTAACACTTAGTTTCAAAACAAGGAAAAGCTGTAGATGctggtttttaatatatatgtttataatgtgtttttttttttttttttttacattcattgaAGTTCTAAGGCTTTTGCTCTCCTCACCAAGTCTTGGTGTTGCTTGTGTGGAGGTCAGTCAGTGTGGTCCACCCGCCTAGGGCAGAGGAATGGGAGCTGGTTGTAGAACTCCAGACGGTTCTGACCTCCTAGAACTGCTCCCGATCCAGAGCTGTGACTGTCATAGCCATGGGTCCTCTCTCTTTGAATACAGCCAGGCCAGAGCCACAGAACTCAGAgagaccaaaaaataataataataataatcgtcaTCATCGTCCTGATTGAAGACTTCAAAGACACCTGGAAATATTTACTTTTGGGCAAAGCAGACAAAACACTCCAGTTATGTTATGTCAtgattttatacatatatataaatgttaataaattatacacaagCATACATATAGGAGCGACACGGCTAAAGTGACGTCCCCAGATCACAATTTCAGAGAGACAAAAAATTAAATTCGGTAAACTGTCAGTCTGTCCAGTCAGAGCTGGGTACGTCTGGGCCTTCCTGTCTGAGCGAGCGAACAGGTGTAtgcgtgtgggtgtgtgtgcgcAATGTCTGATGGGGGGTCTcgtattttaacaatatttataatgttcACGTTAGTAATTGGGATTTGCTGCCTGGGCCCTTAGTCCTGGGGGACTGGGAGACAGGGCAGATGTTGGGACAAATGTCTTTCGACTGCGCGAGTTACTGGGGGTGGGATGAAATCCAGGCAAAATGCATTAATTCTGTTAAATGAATTGTTCGGATGCCAGCCTGCCATATACGTCCCAGACAAATGCCTGGTAAACTGGgctgatacatttttttatcaaGCCTGTTCAACGAGGTGTGATCACACAGAAGTCACACTGGGTACGTAAAGGGTGGAAAACGTGACATTTTGCGCCCtggcctgtctgtctctcacgcAGCCCCAGGCCCTGAGGGCAGTAGTGTGGGACCAGGCACGGTAGGCGGCTGCAGGAGGAGAATGGTGATTGGCTGCTGCAGGTATTGGGAGCAGGTGAGACAGTCTGTGTGGAGTCCTTAGGAAATACTgg

Function

GO: NA

KEGG:

id description
K16302 CNNM; metal transporter CNNM

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020868 True 4632 mRNA 0.55 7 35376270 35401524

Neighbor

gene id symbol gene type direction distance location
AMCG00020863 LOC102779543,LOC108260282,LOC102217523,LOC106917416,LOC103149690,LOC106950839,LOC103473804,LOC101061943 coding upstream 19754 35354706 ~ 35356516 (+)
AMCG00020864 NA coding upstream 88452 35277860 ~ 35287818 (+)
AMCG00020859 NA coding upstream 200657 35173026 ~ 35175613 (+)
AMCG00020857 purb,LOC104936618 coding upstream 204169 35171052 ~ 35172101 (+)
AMCG00020856 NA coding upstream 215174 35158674 ~ 35161096 (+)
AMCG00020869 NA coding downstream 3619 35405143 ~ 35412795 (+)
AMCG00020872 NA coding downstream 14528 35416052 ~ 35416845 (+)
AMCG00020875 NA coding downstream 326228 35727752 ~ 35736989 (+)
AMCG00020883 LOC106579887,LOC106585549 coding downstream 418632 35820156 ~ 35827073 (+)
AMCG00020884 NA coding downstream 450115 35851639 ~ 35859695 (+)
G66151 NA non-coding upstream 205995 35167068 ~ 35170275 (+)
G66072 NA non-coding upstream 350041 35025003 ~ 35026229 (+)
G65995 NA non-coding upstream 626119 34749498 ~ 34750151 (+)
G65996 NA non-coding upstream 626927 34749127 ~ 34749343 (+)
G65994 NA non-coding upstream 628156 34746893 ~ 34748114 (+)
G66231 NA non-coding downstream 31744 35433268 ~ 35433558 (+)
G66258 NA non-coding downstream 151379 35552903 ~ 35553230 (+)
G66290 NA non-coding downstream 314521 35716045 ~ 35716249 (+)
G66319 NA non-coding downstream 356584 35758108 ~ 35761032 (+)
G66325 NA non-coding downstream 366717 35768241 ~ 35768571 (+)
G66149 NA other upstream 211285 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 226852 35147603 ~ 35149418 (+)
G66060 NA other upstream 367948 34967844 ~ 35008322 (+)
G66008 NA other upstream 588796 34784212 ~ 34787474 (+)
AMCG00020820 NA other upstream 964650 34404534 ~ 34411620 (+)
AMCG00020874 NA other downstream 345632 35747156 ~ 35750446 (+)
G66362 NA other downstream 465869 35867393 ~ 35908402 (+)
G66506 NA other downstream 853175 36254699 ~ 36256511 (+)
G66551 NA other downstream 1513291 36914815 ~ 36917436 (+)
AMCG00020942 NA other downstream 2165512 37567036 ~ 37575856 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000204_00434800_00460139 CNNM4 coding CI01000204 null 434694 ~ 460223 (-)