AMCG00020875


Basic Information

Item Value
gene id AMCG00020875
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35727752 ~ 35736989 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020875
TGCCGGCTGTGCCCTGGGCCCAGAGTTCTGGTGCCAGGATGTCCGCAGCGCCCTACAGGCAACGACAGCTGCAAGGACTGTGCCCAGATCttcgagctgctcctggacatGCTGTCGAATGCAGACACGCAGGAGATTATCAAGGATACTCTGGAAGAGTTATGCAACCGCTTGCCCACTGCGGAGACCAGGGCCCAGTGCCTCAAACAGGTGGACACCAAGATACCCTTGGTCATCAACTTCCTGACCACTAAAGTCAACCCTGGCAGTGTATGTATCATGCTGGGAATTTGTCACATCCATTCGGAGACCAGGAATCTGGAGCTGCTGTCCAATCAAATTGCAGATGATGAACTGCGCCACAGCCTTGTTCAGAAGGGCACAAGCTCAGAGGAAGCCATTGTCCACCTGCTGGCAGAGGTCTGCACCCACCTGCCTGCAAAGTATGCCGAGGAGTGTCAGAACTTTGTGAACACCTATGGCAAGACTGTGCTGGAGTACCTGCTGGCCTCCATGGCTCCACACACCATCTGCTTCCTGCTGCACCTCTGCCTGACTGAGGAGAGCCCTGTTCTAGGCAATGAGCCGGACTGCGAGGCCTGTCTGAGTGTGACCGCCTTGGCACAGATCACCCTGGGCACCAATGCCACCGAGGACCAGACCGCGGCCGTCATGGACACCGTGTGCCACTACTACCCCTCTGCCATCCCTGCGTGCAAGAACTTCACCGACGAGTACAAACCCAAGCTGCTGAAGGTGCTGGCGAAGCCGTGGGACACTCACACCATGTGCAGGGAAGTCCAGGCCTGCGCCACAGTGAAAAAGGTCCCCCTGCttggagaaaacaaatgtacctGGGGACCCTCCTACTGGTGCACCGATATGCATAGTGCCTCCCAGTGCAACGCGGTGGAGCATTGCCAGGCGCACGTGTGGAAG

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020875 True 939 mRNA 0.57 9 35727752 35736989

Neighbor

gene id symbol gene type direction distance location
AMCG00020872 NA coding upstream 310907 35416052 ~ 35416845 (+)
AMCG00020869 NA coding upstream 314957 35405143 ~ 35412795 (+)
AMCG00020868 NA coding upstream 326228 35376270 ~ 35401524 (+)
AMCG00020863 LOC102779543,LOC108260282,LOC102217523,LOC106917416,LOC103149690,LOC106950839,LOC103473804,LOC101061943 coding upstream 371236 35354706 ~ 35356516 (+)
AMCG00020864 NA coding upstream 439934 35277860 ~ 35287818 (+)
AMCG00020883 LOC106579887,LOC106585549 coding downstream 83167 35820156 ~ 35827073 (+)
AMCG00020884 NA coding downstream 114650 35851639 ~ 35859695 (+)
AMCG00020891 NA coding downstream 172363 35909352 ~ 35926494 (+)
AMCG00020893 tmed4,LOC107093818,LOC106566412,LOC101466713,LOC102209141 coding downstream 193633 35930622 ~ 35937150 (+)
AMCG00020892 ddx56,LOC107751685 coding downstream 200453 35937442 ~ 35950175 (+)
G66290 NA non-coding upstream 11503 35716045 ~ 35716249 (+)
G66258 NA non-coding upstream 174522 35552903 ~ 35553230 (+)
G66231 NA non-coding upstream 294194 35433268 ~ 35433558 (+)
G66151 NA non-coding upstream 557477 35167068 ~ 35170275 (+)
G66072 NA non-coding upstream 701523 35025003 ~ 35026229 (+)
G66319 NA non-coding downstream 21119 35758108 ~ 35761032 (+)
G66325 NA non-coding downstream 31252 35768241 ~ 35768571 (+)
G66342 NA non-coding downstream 61721 35798710 ~ 35857028 (+)
G66348 tmem127,LOC106585551,LOC107713035,LOC107699648 non-coding downstream 76754 35813743 ~ 35817779 (+)
G66395 NA non-coding downstream 267630 36004619 ~ 36074421 (+)
G66149 NA other upstream 562767 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 578334 35147603 ~ 35149418 (+)
G66060 NA other upstream 719430 34967844 ~ 35008322 (+)
G66008 NA other upstream 940278 34784212 ~ 34787474 (+)
AMCG00020820 NA other upstream 1316132 34404534 ~ 34411620 (+)
AMCG00020874 NA other downstream 10167 35747156 ~ 35750446 (+)
G66362 NA other downstream 130404 35867393 ~ 35908402 (+)
G66506 NA other downstream 517710 36254699 ~ 36256511 (+)
G66551 NA other downstream 1177826 36914815 ~ 36917436 (+)
AMCG00020942 NA other downstream 1830047 37567036 ~ 37575856 (+)

Expression


Co-expression Network