AMCG00020879


Basic Information

Item Value
gene id AMCG00020879
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35679433 ~ 35690340 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020879
AGGAAAAACACACGCCTTGGCGCTTCAAACACCCCATTCGCCCGCTGGCTGCCCTCGGAATATGATGACGGGATTTTCACTCCCAAAGGATGGGACCCTTCCAAACGCTATAATGGGTTTCCCCTTCCCCTGGTCCGAGAAGTCTCCAATAAGATTCTGAGGACTCGAAACCAGGATGTGGAGAGCGACACCATCTACACCCACTTCCTGACCATCTTCGGCCAATGGACCGACCACGACCTGACCATCACTCCGTTCTCTCCCAGCATTCGCTCCTTCAGCAACGGGATCGACTGTGACAAGAGCTGCCAGCAAGCCAGCCCATGCTTCCCCATTAGGATCCCGCTCGGCGACAACAGGATCCGCAACACGTCCAACTGCATCCCGTTCTTCCGCTCGGCCCCGGCCTGCGGCACGGGTGACAACGGGTACATGTTCGGTGGGCCCAACGTCCGGGAACAGATCAACGCCCTCACTGCCTTCATCGATGTGGGCCAGGTGTACGGCCCCGAAGAGAATCTGGCCCTGTCCCTGCGCAACCTGACCAACGACCTGGGGCTGTTGGCCATCAATCAGAACTTCTCAGACAACGGACGGGAGTTCCTCCCCTTCAGCCAAAAGACTGTCAATATGTGCGCCACCCGCAGGAAAGCCACCAATAACAACGCGCTGACCGAGGTGCCCTGCTTCGTAGCAGGTGACGAGCGGGTGGACGAGAACATCGGTTTGGCGTCTACCCACACGCTGTTCATGCGGGAGCATAACCGACTGGCGCGTGGCCTCCGATCCCTCAACCCCCACTGGAGCGGGGAGAAGATCTACCAGGAGGCCCGGAAGATCATGGGGGGATATCACCAGGTCATGACCTTCCGGGACTACCTGCCCCGGATCGTGGGCCCAGATGCCATGACCAGGCTGCTACCCTCTTACAGAGGCTATAATGAGAACATGGACCCCAGCATCGCCAACGTCTTCTCCACCGCCGCCTTCCGCTTCGCCCACCTCGCCATACAGCCCTTCATGTTCCGGCTGGACAACAACTACAAAGAGCACCCCCGCTTCCCCAGCGTCTTGCTGCACAACGCCTTCTTCACGCCCTGGAGGCTGCTGTTTGAAGGTGGCATCGACCCTCTCATCCGGGGGCTCATCGGCCGCCCAGCCAAACTCAACACCCAGCAGCACATGATGCACGACGAGCTGAGAGAGCGTCTCTTCGAGCTCACCAGCCGTCTGGCCCTGGACCTGGGGTCTCTGAACATGCAACGCGGGAGGGACCATGGCCTGCCTGGTGAGAACAACTCCCCTCCCCTTCATCATTCCCCATTCAGCCCAGGTTTTGCTATGCATTTTTTGTACGGGACCCCTGACAACATCGACGTCTGGCTTGGGGGAGTGGCTGAACCTTTTGTGAGGGGGGGGCGAGTCGGGGAGCTCTTCGCCTGCATCATCGCCACGCAGTTCCAGAAAATCCGGAGCGGAGACAGGTTCTGGTGGGAGAGGAAGGAAGTGTTCACCAGCAATCAGCAGGCCGCCCTCCGCCGAGTTCGGTTAGCCAGGATCATCTGTGACAACACGGGGATCACAGACGTCCCCAGCGACCCCTTCCTGTACAGCCCCCGCGGCCAGAGTTACACCAGATGCTCCAGCATCCCCACCTTCGACCTGAACCCCTGGAAGGAAGCAAATTCTTCCGGATCCAGCCCACCCCCTGGACACAAAACCTACACTGGACAGCATGGACCCCAGGGTGCAGAGGGACCCAGAGGAAATCCTGGACCACTGGGGGCCCCAGGTCTGCAAGAAGCCAAGGGCCcgcggggagagagagggccTCCCGGTCTCGCCACCAACCTCCCGAAGTCTGCCTTCTCCACCCGGCTGGGCTACAGCAACCCCCCCCCAGACCGCCCCATCGTGTTCCGGGAGACCATCTACAACGGGCAGAACCATTACGACAACCAGACAGGGGTGTTCACCTGTGTCTTGCCCGGTGTGTACGAGTTCAACTTCTCCTGCAGGCTGTACAGGAATCTGGGCAACATTGAGCTGAAGAAGAATGGTGTGAACGTTGGGCACTCCATCAGCTCCTACAGTGGGGGCTACATCAGCGCCACAGGCAGTAGCATGGTGCCATTGGAGCAGGGAGACCAAGTCTGGCTGCAGTCCAGCTCCGGTGGCAACACCCTGACCGCAGAGAGCTTCTTCTCGGGGCACCTGATCTTCTCTGTGTAAATTGTGCACACGGCCTGTCactttctgtcttttcttttaattcatttaagaTCAGAATTACTTTTATATAATGCGTTTATGTTTTGATTCTAAATTTGTATCCCATAAATCTTATGCCTCAACTGTAGCAAGCTttcaatagaaaatacattaaaaaaaaaaaatcccaaaagtctggtaaagtttttaaaaatgaaaagtcaaTGAATGTTATCTTTGTCTTCTGACTGCAATTCACTGGAAGTGTAAAACAGCAGAATTCCTACTTTTACCAAAACCATATTGGGATTCCTGGAAACATAAATAAGTGTAATAAAGTATAAGGTGAATAAACaagttattaatatatatataatagctcAGAGAGGTAATGTCATTTTCAGGCTTCCTGATCATCCCATGAAGTAATTTATGCAAATAAGCTTTGttaattatgataatttaatctcaattattattgaatattttttttaatataaaaagtctctgcatttaaattgtaatgcatGCAATGTAAGGCAAATAACtatcaaataaaagtaattaaaatacaagataaA

Function

GO: NA

KEGG:

id description
K10788 EPX, EPO; eosinophil peroxidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020879 True 2792 mRNA 0.53 10 35679433 35690340

Neighbor

gene id symbol gene type direction distance location
AMCG00020882 NA coding downstream 3533 35671530 ~ 35675900 (-)
AMCG00020881 NA coding downstream 21321 35637050 ~ 35658112 (-)
AMCG00020877 NA coding downstream 47448 35618624 ~ 35631985 (-)
AMCG00020873 LOC105027009,LOC106585261,LOC106580343 coding downstream 88090 35586821 ~ 35591343 (-)
AMCG00020870 LOC102300863 coding downstream 194008 35446854 ~ 35485425 (-)
AMCG00020878 usp39,LOC106585262,LOC106580344 coding upstream 49705 35740045 ~ 35746487 (-)
AMCG00020880 mat2a,LOC102784064,LOC101478089,LOC105026123,LOC106580346 coding upstream 69511 35759851 ~ 35765430 (-)
AMCG00020886 NA coding upstream 88703 35779043 ~ 35790548 (-)
AMCG00020889 NA coding upstream 110945 35801285 ~ 35810870 (-)
AMCG00020885 snrnp200,LOC106585548,LOC106579886 coding upstream 136942 35827282 ~ 35847057 (-)
G66259 NA non-coding downstream 177121 35436290 ~ 35502312 (-)
G66232 NA non-coding downstream 245868 35433278 ~ 35433565 (-)
G66228 NA non-coding downstream 250039 35429184 ~ 35429394 (-)
G66181 NA non-coding downstream 426764 35252402 ~ 35252669 (-)
G66154 NA non-coding downstream 543870 35134978 ~ 35135563 (-)
G66284 NA non-coding upstream 12423 35702763 ~ 35703073 (-)
G66327 NA non-coding upstream 81144 35771484 ~ 35771686 (-)
G66416 NA non-coding upstream 236198 35926538 ~ 35937258 (-)
G66499 NA non-coding upstream 545432 36235772 ~ 36236927 (-)
G66527 NA non-coding upstream 1057175 36747515 ~ 36747743 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other downstream 329934 35344706 ~ 35349499 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other downstream 509254 35149568 ~ 35170179 (-)
G66054 NA other downstream 814128 34862619 ~ 34865305 (-)
AMCG00020837 NA other downstream 838110 34838761 ~ 34841323 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other downstream 865139 34808604 ~ 34814294 (-)
AMCG00020876 NA other upstream 4628 35694968 ~ 35696969 (-)
AMCG00020887 tmem127 other upstream 123533 35813873 ~ 35819830 (-)
AMCG00020900 NA other upstream 285424 35975764 ~ 35986712 (-)
AMCG00020911 NA other upstream 570653 36260993 ~ 36282529 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other upstream 1329671 37020011 ~ 37045939 (-)

Expression


Co-expression Network