AMCG00020882


Basic Information

Item Value
gene id AMCG00020882
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 35671530 ~ 35675900 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020882
ATGGAGAGCTGGACCACCAACTTTCCAGAGTCACTTGCTGCTGCCACTGCAGATCGCTCTCTCTGGTTCACGCTGTGCTTCTCCTGCCTGCCCCCAGTCACAGGGTACAATGCCTGGCGTGGATTCTGCGGCCTGTCTCAGCCCAAGAACGTACAGCAGCTGGGCTCTGTGCTCCGGAACCCCGATCTGGCACGGCGACTGATACAGTTGTACGGGACCCCTGACAACATCGACGTCTGGCTGGGGGGAGTGGCTGAGCCTTTTGTGAGGGGAAGGTTCTGGTGGGAGAGGAGGGAAGTGTTTACCAGCAATCAGCAGGCCGCCCTCCGCAGAGTCCAGTTAGCCAGGATCATCTGCGATAACACGGGGATCACAGACGTCCCCAGCGACCCCTTCCTGTACAGCCCCCGCGGCCAGAGTTACAACAGATGCTCCAGCATCCCCACCTTCGACCTGAACCCCTGGAAGGAAGCAAGTGAGTCCAGGCTGTGA

Function

GO: NA

KEGG:

id description
ko04611 Platelet activation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020882 True 492 mRNA 0.60 3 35671530 35675900

Neighbor

gene id symbol gene type direction distance location
AMCG00020881 NA coding downstream 13418 35637050 ~ 35658112 (-)
AMCG00020877 NA coding downstream 39545 35618624 ~ 35631985 (-)
AMCG00020873 LOC105027009,LOC106585261,LOC106580343 coding downstream 80187 35586821 ~ 35591343 (-)
AMCG00020870 LOC102300863 coding downstream 186105 35446854 ~ 35485425 (-)
AMCG00020871 LOC104941581 coding downstream 226512 35440029 ~ 35445018 (-)
AMCG00020879 NA coding upstream 3533 35679433 ~ 35690340 (-)
AMCG00020878 usp39,LOC106585262,LOC106580344 coding upstream 64145 35740045 ~ 35746487 (-)
AMCG00020880 mat2a,LOC102784064,LOC101478089,LOC105026123,LOC106580346 coding upstream 83951 35759851 ~ 35765430 (-)
AMCG00020886 NA coding upstream 103143 35779043 ~ 35790548 (-)
AMCG00020889 NA coding upstream 125385 35801285 ~ 35810870 (-)
G66259 NA non-coding downstream 169218 35436290 ~ 35502312 (-)
G66232 NA non-coding downstream 237965 35433278 ~ 35433565 (-)
G66228 NA non-coding downstream 242136 35429184 ~ 35429394 (-)
G66181 NA non-coding downstream 418861 35252402 ~ 35252669 (-)
G66154 NA non-coding downstream 535967 35134978 ~ 35135563 (-)
G66284 NA non-coding upstream 26863 35702763 ~ 35703073 (-)
G66327 NA non-coding upstream 95584 35771484 ~ 35771686 (-)
G66416 NA non-coding upstream 250638 35926538 ~ 35937258 (-)
G66499 NA non-coding upstream 559872 36235772 ~ 36236927 (-)
G66527 NA non-coding upstream 1071615 36747515 ~ 36747743 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other downstream 322031 35344706 ~ 35349499 (-)
AMCG00020853 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 other downstream 501351 35149568 ~ 35170179 (-)
G66054 NA other downstream 806225 34862619 ~ 34865305 (-)
AMCG00020837 NA other downstream 830207 34838761 ~ 34841323 (-)
AMCG00020836 snrnp27,snut3,LOC106585104 other downstream 857236 34808604 ~ 34814294 (-)
AMCG00020876 NA other upstream 19068 35694968 ~ 35696969 (-)
AMCG00020887 tmem127 other upstream 137973 35813873 ~ 35819830 (-)
AMCG00020900 NA other upstream 299864 35975764 ~ 35986712 (-)
AMCG00020911 NA other upstream 585093 36260993 ~ 36282529 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other upstream 1344111 37020011 ~ 37045939 (-)

Expression


Co-expression Network