AMCG00020894


Basic Information

Item Value
gene id AMCG00020894
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36034871 ~ 36043978 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020894
CGTCTGTCGGAGTGAAAGGTGAGAGTTCAAGGGGCAGGAACTAGCGGCGCGGGATTTCTTGATGTTGTGTCAGTGGTGTGCAGCGTGATCCGGCGCAGGAGGAGAAGATAGATCTGTCCGAGTTATTGTTTTAGATCAAAATACAGctgcCATGTTCTCTGATCTGACAGGCCAGAGACAGGGGACGCTTCTGGGTCCTCCTGCCCCTCAGGGCCCAGTGTTTGAGCGAGTGCGGCCCTCCTATGTCAACTGCTCGGAGCGCTTCAAGCTGGGCGAGCGCACCTTCAGCCGCCAGTACGCCCACATCTACGCCACCCGGCTGGAGGAGATGAGGCCCACACTCACCCAGCGAGCCCAGCAGACATGGGGTGCAAACGTGCAGGTCAAGAAGCTCTTTGAAATCGAGATGGGGGAGCAGTGCTGCATTGTGGGAACTATCTTCAAGCACATGGAGCTGCAGCCGTCCATCCTACGGGAGATCAGTGAGGAGCACAATCTCCTGCCTCAGCCGCCCCGCGCCAAGTACATCAGCCAATCAGACGAGCTCATCCTGGAGGACGAGCTGCAGAGGATCAAGCTGGAAGGCAACATAGACACGCAGAAATTCGtcacaggcaaggaggtctttTTGTCGCTGTGGCACTTGGTTGGGCTGGGTACAGCCTACGCAGTGATGATCGGAGATAGTGCAAGTAGTGTGATCGCTGTGTTTGGAGCAGAGAAGAATGATGGGAAGTTCATGGTGGAGGggctggggctggggggcACCAGTGCGGACAGTCTCCTGGGGCTGCAGCTGCTGGTGGACATGGTGACGGGGCAGCTGGGAGACGAGGGAGAGCAGAGTGGGGCGTCGCTCATCTCCCGGGTGCTGCTGGCGGGAAACCTGCTGAGCCAGAGGACCCAGGGCAAGGACTCGGTGAACAAGGCCAAGTACCTGACCAAGAAGACGCAGGCAGGCAGCGTGGAGGCCATCCGCATATTGGACGAGATCCTTGTGCAGCTTGTGGCCTCGGTGCCTGTGGACCTCATGCCAGGAGAATATGACCCCACCAACTACACCCTCCCCCAGCAGCCTTTGCACCGCTGCATGTTCCCCCTGTCCACAGCCTACCCCACCCTGCAGCTCGTCAGTAACCCCTTCCAGGCCGAAATCGACGGGATCCGGTTCCTGGGTACTGCGGGCCAGAACGTGAAAGACATCTGCAGGTACAGCAGCCAGGACGACCACCTGGACATCCTGGAGAACACGCTGCGACTCCGCCACCTGGCACCCACTGCCCCTGACACGCTGGGCTGCTACCCCTTCTACCAGAGTGACCCCTTCATTCTCCAGGAGTGTCCCGACATCTATTTCTGTGGCAACGCTCCTTCCTACCAGTCCAAGCACATCACAGGAGCTGATGGCCAGGAGGTCCTCCTTGTCGCTATCCCAGAGTTCTGCACCACCCAGACCGCCTGCCTGGTCAACCTGCGCAATCTGGACTGTCAGCCCATCAGCTTCTCGGCCTTCTCGGGAGAGGACCAGGAAGAGAGTGAAATGAACGTCAGCCACTGAGGGGCCAATTGGAAGGACTCCCACAGGCAGGGGTGGTGGGTGGGGTCTTGCTGGCACTGGGGTCTTCCCTCTTGACAGGCCCCTTGTCCTGACAGCGGGCATTGGCTGCATCTGGCTGCCTTGAAATCACTCTGCAGCCACACAGTAGGCCAAAATGCATGATGCCTTTGTTCAAACTGACTTGAACATTTTGTACTGGACATtgagtataatatatatattacttatgtACAATTCACCAGGAACTTGTGGTCCTGGATGCCAAACTGTATCCACCTGGAGTTTCATAAGCTGAACACCATACTGTTTCCTGTTTCTTCGTATCTTTCTTGTAAGTCCATTTGCACTCTTCACCCACACCCGTTATTTATTGATCAGTTATCCAGTTGCTGTATCTGAATTCTCGAGAACCGCTTCCGGAATCATGTGACctgattgtgttttgtgaagtgtGTTGTGAAATCCCTCGgataaagtgttttaaaatctgtagTTACGAGGGGGTTTACTAGTCATGAGTGGGAAGCAGTTAAGAAAAGACATTTGATGTTTACTGTCTGTTAGTTTATACATGCATCAACTATAAAGTGAGGGGAGAAAGactttaaatatagattttcatttgttcttcctttttttttgacagaacagacaacaaatgtaaataaacttgAAGCTCTTGCTTTTATTATGAGAGAGATGACTTTCCATTGTCTGTCTTCATCACGCTGCACATTttcctggaaaacaaacaaacaaaaagccgAAGGAAAACAGACCTGTTCCTAACTTTGCTGGTAATGAAAACATGGGGAAAACATCCTTTACTTTAGCTGGCATTGCTAGTGCAGAAACATACATGGAGTTCCCAAACTTACACTAGTCTACACACAATTCTGTTTAACTGCATTATAATAAATTGGTATTAATTTCATACATTCATGATCAAGGTTTTTGTACCTGCCGTGCCTTGTTGTGTGTGCATTGCTTACATTCTTCAGTTTCAATAGACCCAAAGCTCCCTCCTGCCTTCTGCTGACTACTTACTAATCAAGTTGCCACTACGAATGTGTGTAACAGTGGTAGGATGTGAAAGACTCCTGTAAGCCctgtgaattgtgtgtgtgtgtgtggaggctGGCTCCAACTCTTAAAAGATCTGACACTGGAAATCATTCGACCGACAGACAATTTTTTAACATGAATTGAAAAGAAGGACGCAGCCCCTCCTGAAACCGTAAGGTGCGAGATTAAAAGTGTCTCCGCTGGTCTTTAATAGTCCTCTATTTTGATCTCAAATTCGTAGTTGCCGGTGGGCTCGGGGGTGTCTGGGTAGAAGACATCATCTGCGGTGGTGGGGCTGTCCACAGTGATCCATGCATCATAGTCTGTGTCTTCTTCGGGGTTGCCATCCGGGAACAGGGGTTCATAGTAGGGGGGTGTAGTAGGAGGCAGGGtcgtggtggtggtggtggtggtggtcgTAGGCATGGTGGTCGTGGTCGGGGGCTCCGTAGTGGTGGCGTTGGCTCGGAGTCGCTGCAGGCGGAGTCGTCGGAGCCTCATACGGCGCAGGCGGAGCAGACGTATTTGCGCACGGGTCAGGGGACGCACCCCACCGTTCCTGATCTGGTTCCCAATCCTCGTGCCGTTCCCGTTCTTGTTCANCAACCGGATGGGCCTGTTCCCGTTCAGGGCGATGATCTGCTGGATGCGGTCCCAGTTGGATTTG

Function

GO:

id name namespace
GO:0006260 DNA replication biological_process
GO:0003887 DNA-directed DNA polymerase activity molecular_function
GO:0003677 DNA binding molecular_function

KEGG:

id description
K02328 POLD2; DNA polymerase delta subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020894 True 3290 mRNA 0.52 12 36034871 36043978

Neighbor

gene id symbol gene type direction distance location
AMCG00020896 myl7,LOC107753162,LOC107703146,LOC107657323 coding upstream 1569 36030333 ~ 36033302 (+)
AMCG00020895 gck,gk,LOC106580581,LOC106585167 coding upstream 5797 36021637 ~ 36029074 (+)
AMCG00020890 NA coding upstream 48179 35958629 ~ 35986692 (+)
AMCG00020892 ddx56,LOC107751685 coding upstream 84696 35937442 ~ 35950175 (+)
AMCG00020893 tmed4,LOC107093818,LOC106566412,LOC101466713,LOC102209141 coding upstream 97721 35930622 ~ 35937150 (+)
AMCG00020902 ash2l coding downstream 57619 36101597 ~ 36114326 (+)
AMCG00020901 bag4,LOC107702866,LOC107571962,LOC103396927 coding downstream 134947 36178925 ~ 36184018 (+)
AMCG00020907 dusp26,LOC102218034,LOC106904628 coding downstream 143771 36187749 ~ 36194843 (+)
AMCG00020908 NA coding downstream 152469 36196447 ~ 36203860 (+)
AMCG00020910 rnf122 coding downstream 161352 36205330 ~ 36226349 (+)
G66342 NA non-coding upstream 177843 35798710 ~ 35857028 (+)
G66348 tmem127,LOC106585551,LOC107713035,LOC107699648 non-coding upstream 217092 35813743 ~ 35817779 (+)
G66325 NA non-coding upstream 266300 35768241 ~ 35768571 (+)
G66319 NA non-coding upstream 273839 35758108 ~ 35761032 (+)
G66290 NA non-coding upstream 318622 35716045 ~ 35716249 (+)
G66524 NA non-coding downstream 680916 36724894 ~ 36725129 (+)
G66528 NA non-coding downstream 762342 36806320 ~ 36806577 (+)
G66602 NA non-coding downstream 1029701 37073679 ~ 37074634 (+)
G66696 NA non-coding downstream 1244536 37288514 ~ 37288841 (+)
G66700 NA non-coding downstream 1257270 37301248 ~ 37301598 (+)
G66362 NA other upstream 126469 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 284425 35747156 ~ 35750446 (+)
G66149 NA other upstream 869886 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 885453 35147603 ~ 35149418 (+)
G66060 NA other upstream 1026549 34967844 ~ 35008322 (+)
G66506 NA other downstream 210721 36254699 ~ 36256511 (+)
G66551 NA other downstream 870837 36914815 ~ 36917436 (+)
AMCG00020942 NA other downstream 1523058 37567036 ~ 37575856 (+)
AMCG00020954 NA other downstream 2073084 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 4277135 40321113 ~ 40321821 (+)

Expression


Co-expression Network