AMCG00020899


Basic Information

Item Value
gene id AMCG00020899
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36005964 ~ 36010739 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020899
ATGTCTGTCTACGAACCAATTACaaccaagaagaagaaaaaaactAGTGCCCTTTCTGTGGCCGAAACCGAGGAAGGGTACTTTCATGTTAAGAAGCCATTGGGGAAGAAGGTGTTTGTGCCAGCAGGAACCCATGGCACCTTTCACACTACGAGGCTGTTCCAGAAGCGGCATCAGGAAAGGTCGCAGTTTGATCTGCAGGACCCCCATTGCCACCTGCTGGACAATGAATACAACTCTCTGCAAGATCCTCACCTGAAGGAGTTCTACAGCAACAAGACCAGACAGCGGAGAATGTACAAACATGGCCTCCTCACCGCAGACAAGAAAGTAGCGTGCTCCTTGAAGGACTATAATAGCTACTGTGACTACCTGAGGTCCGTCAAGATGGATTGGGACAAGAACTACATGAAGCAACAGAAGGAGCTGGTGAAACAGTTCCTGATCCTACAGGAGGAAGAGAAGGTCCCGCAGGACATGTCTGTCCAGGACGTGACGGAGTGGCTCCTGGAGCAGGGCTGGATTTCATTCGGGCAGCAGGGCGAGGCTCACAGGCTTCGGAACCAGCTGGGCAATCGCCGGACAGAACAGGCCATGAAAGCCGCTGAGCAGGCCTGGAAGGCAAACCAACGCCAGATGCTGCAGAAAATGGAGACGGAGTCACGAAGGGAGCTGAGGCTGGAGCAGCACTGGAAGAAACCCTCCATGAAGCATGAGGCGCCGAAGCCGGTGCGAACGGTCTCTCAAACTGGCAGGAAAACAAGTAAGGACTGTGACACCCCGACACTCACTAGAAAAATCCACCTCAAACCCTGTCAGATTAGACTGCACTGTTGAGACTCCTAATGTGGAGCAGAATAAGCATTAGACTGGGGGTCTGACTCGTCTCACCGCAGTCCATGTTCTGAACTCCCTGTGTTTCTCCTCTCTTTCACCACAGAGACTCTCTCCACTGTTGAGAAAGAGTTCACGCTCTACCATTCAAAGCCGACCCCGCCGGCACAGCCGTCTGACGAACCCCGTAGCAGCCCAACCCCTCACAGCAGCCTGACCGCTAAAAGAAGCCCCCGCAGCAGCAAACTGACCCCTCACAGCAGCCCCAGCACCGGCCCAACCCCTAAAACCAGCCCGACCCCTAAAACCAGCCCGACCCCTAAAAGCAGCCCAACCCCTCGCAGCAAACTGACCCCTAAAAGCAGCCCGACCCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020899 True 1210 mRNA 0.54 8 36005964 36010739

Neighbor

gene id symbol gene type direction distance location
AMCG00020897 ykt6,LOC108441080,LOC107733284,LOC107751647,LOC107602234,LOC106580580 coding downstream 5432 35992397 ~ 36000532 (-)
AMCG00020888 NA coding downstream 125876 35864134 ~ 35880088 (-)
AMCG00020885 snrnp200,LOC106585548,LOC106579886 coding downstream 158907 35827282 ~ 35847057 (-)
AMCG00020889 NA coding downstream 195094 35801285 ~ 35810870 (-)
AMCG00020886 NA coding downstream 215416 35779043 ~ 35790548 (-)
AMCG00020898 NA coding upstream 31120 36041859 ~ 36066073 (-)
AMCG00020904 LOC103396926 coding upstream 79802 36090541 ~ 36100893 (-)
AMCG00020906 star coding upstream 103890 36114629 ~ 36117694 (-)
AMCG00020905 LOC107756834,LOC107691567,LOC107548280 coding upstream 117623 36128362 ~ 36143093 (-)
AMCG00020903 NA coding upstream 164610 36175349 ~ 36178261 (-)
G66416 NA non-coding downstream 68706 35926538 ~ 35937258 (-)
G66327 NA non-coding downstream 234278 35771484 ~ 35771686 (-)
G66284 NA non-coding downstream 302891 35702763 ~ 35703073 (-)
G66259 NA non-coding downstream 503652 35436290 ~ 35502312 (-)
G66232 NA non-coding downstream 572399 35433278 ~ 35433565 (-)
G66499 NA non-coding upstream 225033 36235772 ~ 36236927 (-)
G66527 NA non-coding upstream 736776 36747515 ~ 36747743 (-)
G66535 NA non-coding upstream 840331 36851070 ~ 36851636 (-)
G66536 NA non-coding upstream 858678 36869417 ~ 36870155 (-)
G66613 NA non-coding upstream 1003242 37013981 ~ 37019796 (-)
AMCG00020900 NA other downstream 19252 35975764 ~ 35986712 (-)
AMCG00020887 tmem127 other downstream 186134 35813873 ~ 35819830 (-)
AMCG00020876 NA other downstream 308995 35694968 ~ 35696969 (-)
G66279 NA other downstream 313504 35650980 ~ 35692460 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other downstream 656465 35344706 ~ 35349499 (-)
AMCG00020911 NA other upstream 250254 36260993 ~ 36282529 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other upstream 1009272 37020011 ~ 37045939 (-)
AMCG00020922 NA other upstream 1050856 37061595 ~ 37067805 (-)
AMCG00020943 NA other upstream 1621038 37631777 ~ 37632576 (-)
AMCG00020970 NA other upstream 3036965 39047704 ~ 39104867 (-)

Expression


Co-expression Network