AMCG00020906 (star)


Basic Information

Item Value
gene id AMCG00020906
gene name star
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36114629 ~ 36117694 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020906
ATGTTGCCTGCGACTTTCAAACTGTGCGCCGGGATCTCCTACAGACATGTGAGGAACATGACCGGGTTGAGGAAGACCGCCGTAGTTGCAATTAACCAGGAACTGAAGAAAATATCTGGACCTGGGCCCAGCGCCTGGATCAGTCAAGTTCGCAGACGCAGCTCCTTGCTAAGCAGCAGGATCGAGGAGAAGCCCTACAGTGAGGTGGACCTGTCCTACATCAAACAGGGGGAGGAAGCCCTGCAGAAGGCCATCAGCATCCTCAGCAACCAAGAGGGCTGGAAGACAGAGATAGTGGCAGCGAACGGGGATAAGGTGCTGAGCAAGGTGCTCCCGGATGTTGGCAAGGTGTTTAAACTGGAGGTGGTGATGGACCAAGCACCTGACAGCCTGTACGGAGAGCTGGTGGGGAACATGGAGCAGATGGGCGAGTGGAACCCCAGTGTCAAAAAAGTCAAGATCCTGCAGAAGATAGGCCAGGACACCATGGTGACGCACGAGGTCGCCGCAGAGACTCCCGGAAACATCGTGGGCCCTCGGGACTTTGTGAGTGTGCGCTGTGCCAAGCGCAGGGGCTCCACCTGCTTCCTGGCTGGGATGTCAACCCACTACCCTGGGATGCCCGAGCAGAAAGGCGTGGTCAGGGCTGAGAATGGGCCAACGTGCATCGTTCTGAGGCCCAATGCAGAGGACCccagaaaaacaaagtttaccTGGCTTCTCAGCATAGATTTGAAAGGTTGGCTGCCCAAGAGCATCATCAATCAAGTGCTTTCCCAGACGCAGGTGGATTTCGCCCAGTGCCTGAGAGCACGAATGGCATCCAACCAGATGAGTCCATCTCTGGCCTGCTGA

Function

symbol description
star Predicted to enable cholesterol binding activity. Acts upstream of or within oocyte maturation. Predicted to be located in mitochondrion. Predicted to be active in mitochondrial intermembrane space. Is expressed in endocrine system; forebrain; gonad; and interrenal primordium. Human ortholog(s) of this gene implicated in congenital adrenal hyperplasia. Orthologous to human STAR (steroidogenic acute regulatory protein).

NR:

description
PREDICTED: steroidogenic acute regulatory protein, mitochondrial

GO:

id name namespace
GO:0008203 cholesterol metabolic process biological_process
GO:0006694 steroid biosynthetic process biological_process
GO:0030301 cholesterol transport biological_process
GO:0005739 mitochondrion cellular_component
GO:0015485 cholesterol binding molecular_function

KEGG:

id description
K16931 STAR; steroidogenic acute regulatory protein, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020906 True 855 mRNA 0.56 7 36114629 36117694

Neighbor

gene id symbol gene type direction distance location
AMCG00020904 LOC103396926 coding downstream 13736 36090541 ~ 36100893 (-)
AMCG00020898 NA coding downstream 48556 36041859 ~ 36066073 (-)
AMCG00020899 NA coding downstream 103890 36005964 ~ 36010739 (-)
AMCG00020897 ykt6,LOC108441080,LOC107733284,LOC107751647,LOC107602234,LOC106580580 coding downstream 114097 35992397 ~ 36000532 (-)
AMCG00020888 NA coding downstream 234541 35864134 ~ 35880088 (-)
AMCG00020905 LOC107756834,LOC107691567,LOC107548280 coding upstream 10668 36128362 ~ 36143093 (-)
AMCG00020903 NA coding upstream 57655 36175349 ~ 36178261 (-)
AMCG00020912 NA coding upstream 128889 36246583 ~ 36256510 (-)
AMCG00020913 LOC102294053 coding upstream 167188 36284882 ~ 36326829 (-)
AMCG00020915 NA coding upstream 754640 36872334 ~ 36874433 (-)
G66416 NA non-coding downstream 177371 35926538 ~ 35937258 (-)
G66327 NA non-coding downstream 342943 35771484 ~ 35771686 (-)
G66284 NA non-coding downstream 411556 35702763 ~ 35703073 (-)
G66259 NA non-coding downstream 612317 35436290 ~ 35502312 (-)
G66232 NA non-coding downstream 681064 35433278 ~ 35433565 (-)
G66499 NA non-coding upstream 118078 36235772 ~ 36236927 (-)
G66527 NA non-coding upstream 629821 36747515 ~ 36747743 (-)
G66535 NA non-coding upstream 733376 36851070 ~ 36851636 (-)
G66536 NA non-coding upstream 751723 36869417 ~ 36870155 (-)
G66613 NA non-coding upstream 896287 37013981 ~ 37019796 (-)
AMCG00020900 NA other downstream 127917 35975764 ~ 35986712 (-)
AMCG00020887 tmem127 other downstream 294799 35813873 ~ 35819830 (-)
AMCG00020876 NA other downstream 417660 35694968 ~ 35696969 (-)
G66279 NA other downstream 422169 35650980 ~ 35692460 (-)
AMCG00020867 zgc:110197,arl3,LOC108263849,LOC106563294,LOC103033567 other downstream 765130 35344706 ~ 35349499 (-)
AMCG00020911 NA other upstream 143299 36260993 ~ 36282529 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other upstream 902317 37020011 ~ 37045939 (-)
AMCG00020922 NA other upstream 943901 37061595 ~ 37067805 (-)
AMCG00020943 NA other upstream 1514083 37631777 ~ 37632576 (-)
AMCG00020970 NA other upstream 2930010 39047704 ~ 39104867 (-)

Expression


Co-expression Network