AMCG00020908


Basic Information

Item Value
gene id AMCG00020908
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 36196447 ~ 36203860 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020908
CCGCCTTTCACCCTCAAGTTCACCCTTGACTACGACATAAACTTCCTCCTCGCCTTTAAACCCCTCCTCCATTCACCACCGGTCTAATAAACACTGTGTTGTCTTCGGCTATGAGCATTGCACTGGGTATAGCTTTAACAACAGCATCGTggcagagaaacacaaagtgcGACAAAATGACGACTTGCTATAATCTGCTGCTTCTCCTGATGCTCTCCTGGGTCTGTGACGTCACCCTGGCGGCGCATCTCCCAAAAGGGCACAACAGCAGACCTATAATCGGCATTTTGACACAGGAAGTCGTTGATGATGTCATGAAGCCCTTCGGGAAGACGTACATACCTGCGGCGTATGTGAAGTTCATCGAGTCTTCTGGGAGCATGGTGATACCTGTGAGatTGAATCAGACACTTGCTGAATATGAAAAGATCTTCAAGTCAATAAACGGACTGCTGTTTATTGGTGGTGCGGCTGATTTGGAGACCTCGGATTTTGCCAGAGATGCAGGCATTTTTTACAAACTTGCTCTGAAGGCCAATGATGTTGGGGACCACTTCCCAGTGTGGGGGACCTGTATGGGGTTTCAACTGCTCACGGTGCTGGTCGCTGAAGAGAATCTGCTGACCAAGACCACAGCAGAAAACCTGGCCTTTCCTCTCAACCTCACAGCAGCTGCCAGGTCAAGCCGAATGTTCAACAGTTTCCCACCTGACCTCCAGAAGGCATTGTCACGGGAACCGCTGACGGGAAATTTCCATCACTACGGCATCGCGGCAGAGACAttcaaaggaaatgaaaaattgGAACGATTCTTCTCCGTCCTGTCCACAAACGTGGCTGAAAATGGCGTGGAGTTTGTTTCCACGATGGAAGGCAGGAAGTATCCATTTTATGGAGTCCAGTGGCATCCGGAAATAAACCAGTTTGAGTGGGATCGCAGTATGACCATCCCCCACTCTGAGAACGCAGTCCGTGTGTCATCTCTACTGGGACAGTTTTTTATCAATGAAGCAAGGAAAAGTTCCCATCGCTTCGCCACGCCCAAGGAAGAGGAGGCCGCCCTGATCTACAATTACACCCCCATGTACACAGGCAACTTCACCGGCTACGAACAGGTCTACTTCTTCTGAGAAGCCCGAACGCACGACTACACTGCCCTCACCGCTTCACTGCCTCAGGTTGCCCGGCCCGCAGACAGACACGAAACGGTCGAAAAACGCAACCAAAACAAGACTCTTGCCTCGGATCGTCCTCATGAATTGCTTCTCAAACAAGAGCGAGAAATCACACGAAAGGCCTCCACACTTGCAACCTTGCTCTCACATTGCACATTCACACACCAGTATTTCAATGACTTGACtgaataattcacatttttaagcaGTCAGACAGTATTCCTGAGTCTATACATTGCTCGGGCTCATGGAGAACTTGGACTGTTCTGCTTTGGGGTGTCTTGGTTTActtatcaaatgttttttctctagAGACTACAGAGAACGGATCGTTAAAGCTAGAAATACTGCAATTAGTTGCATAAGTTCCTGTAATAACAGCTGTGTTATCTactaactttttttaaaaaaagtgtaacaAATGTGAGACAGATAGTAATTTTGTTCCCAAAGATGCCTGTGTGTAAATATACTGCAGCTGTTAATGGGTTTGGGTAGGGATGTGATCCAATGACAGGGAGATGGTTATTCTTGTTGTTCAGAATCTCTCAGGAAATGCATTTTGGTGCATTTTTCTTGTGTACTGTCCTTGTAAATGGCTTTAGGACAGTAACAACTGATActgataaaatgcattttttatatagtaataatatacaccacaaaaaaaaaaaaaacggactCATCACAGTGTAGAAAAAGTGGTACGCTGACTTTAAATGTCCTGACTTCATATGCATTTGGTATTGTGGAAGTTCGTATGAATTCATGTTATCGATTAgttgtgatgaaaagtgcagGATTCCAGGAAAAGAAGGggaacttaaaaaatatatgaatgtgtcAGAACTGAgtcatttaaaagtttgtgCTTTTTTCAAAAAAGTATAGAGATATGTGCTTTAGTGAATGCAGTATATATTGGTCGTTTTAAACCACCACTACTATTACTTTTGCTGCtacaaataatcataataataatataatttatggaTGTATCCAATTGTCTTAATATTGTATATAGAAACTGTAAAGTTTGACAGAAGACGTGACCCAGCATTTAAGTTAGTCTGAagcactaattaattaattggacaGCTGGGGAGGGACAGAGTGGCGTCCAGGGCAGTGGCCGGCCTCTTTGACACAACAATACACCATTGTTATTAGAGAA

Function

GO:

id name namespace
GO:0006541 glutamine metabolic process biological_process
GO:0008242 omega peptidase activity molecular_function

KEGG:

id description
K01307 GGH; gamma-glutamyl hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020908 True 2349 mRNA 0.44 9 36196447 36203860

Neighbor

gene id symbol gene type direction distance location
AMCG00020907 dusp26,LOC102218034,LOC106904628 coding upstream 1604 36187749 ~ 36194843 (+)
AMCG00020901 bag4,LOC107702866,LOC107571962,LOC103396927 coding upstream 12429 36178925 ~ 36184018 (+)
AMCG00020902 ash2l coding upstream 82121 36101597 ~ 36114326 (+)
AMCG00020894 NA coding upstream 152469 36034871 ~ 36043978 (+)
AMCG00020896 myl7,LOC107753162,LOC107703146,LOC107657323 coding upstream 163145 36030333 ~ 36033302 (+)
AMCG00020910 rnf122 coding downstream 1470 36205330 ~ 36226349 (+)
AMCG00020909 mak16 coding downstream 31073 36234933 ~ 36241220 (+)
AMCG00020914 NA coding downstream 647635 36851495 ~ 36869578 (+)
AMCG00020919 NA coding downstream 843782 37047642 ~ 37058036 (+)
AMCG00020925 NA coding downstream 890426 37094286 ~ 37112090 (+)
G66395 NA non-coding upstream 122026 36004619 ~ 36074421 (+)
G66342 NA non-coding upstream 339419 35798710 ~ 35857028 (+)
G66348 tmem127,LOC106585551,LOC107713035,LOC107699648 non-coding upstream 378668 35813743 ~ 35817779 (+)
G66325 NA non-coding upstream 427876 35768241 ~ 35768571 (+)
G66319 NA non-coding upstream 435415 35758108 ~ 35761032 (+)
G66524 NA non-coding downstream 521034 36724894 ~ 36725129 (+)
G66528 NA non-coding downstream 602460 36806320 ~ 36806577 (+)
G66602 NA non-coding downstream 869819 37073679 ~ 37074634 (+)
G66696 NA non-coding downstream 1084654 37288514 ~ 37288841 (+)
G66700 NA non-coding downstream 1097388 37301248 ~ 37301598 (+)
G66362 NA other upstream 288045 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 446001 35747156 ~ 35750446 (+)
G66149 NA other upstream 1031462 35163813 ~ 35164985 (+)
AMCG00020855 NA other upstream 1047029 35147603 ~ 35149418 (+)
G66060 NA other upstream 1188125 34967844 ~ 35008322 (+)
G66506 NA other downstream 50839 36254699 ~ 36256511 (+)
G66551 NA other downstream 710955 36914815 ~ 36917436 (+)
AMCG00020942 NA other downstream 1363176 37567036 ~ 37575856 (+)
AMCG00020954 NA other downstream 1913202 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 4117253 40321113 ~ 40321821 (+)

Expression


Co-expression Network