Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020918 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 36909159 ~ 36913434 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0097458 | obsolete neuron part | cellular_component |
| GO:0001917 | photoreceptor inner segment | cellular_component |
| id | description |
|---|---|
| ko04744 | Phototransduction |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020918 | True | 270 | mRNA | 0.59 | 2 | 36909159 | 36913434 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020917 | NA | coding | downstream | 15032 | 36877475 ~ 36894127 (-) |
| AMCG00020915 | NA | coding | downstream | 34726 | 36872334 ~ 36874433 (-) |
| AMCG00020913 | LOC102294053 | coding | downstream | 582330 | 36284882 ~ 36326829 (-) |
| AMCG00020912 | NA | coding | downstream | 652649 | 36246583 ~ 36256510 (-) |
| AMCG00020903 | NA | coding | downstream | 730898 | 36175349 ~ 36178261 (-) |
| AMCG00020916 | NA | coding | upstream | 1053 | 36914487 ~ 36931628 (-) |
| AMCG00020924 | NA | coding | upstream | 60975 | 36974409 ~ 36998756 (-) |
| AMCG00020921 | plpp5,LOC107553701,LOC107678050,LOC107720719 | coding | upstream | 86991 | 37000425 ~ 37012235 (-) |
| AMCG00020920 | NA | coding | upstream | 156081 | 37069515 ~ 37074577 (-) |
| AMCG00020928 | NA | coding | upstream | 202109 | 37115543 ~ 37122859 (-) |
| G66536 | NA | non-coding | downstream | 39004 | 36869417 ~ 36870155 (-) |
| G66535 | NA | non-coding | downstream | 57523 | 36851070 ~ 36851636 (-) |
| G66527 | NA | non-coding | downstream | 161416 | 36747515 ~ 36747743 (-) |
| G66499 | NA | non-coding | downstream | 672232 | 36235772 ~ 36236927 (-) |
| G66416 | NA | non-coding | downstream | 971901 | 35926538 ~ 35937258 (-) |
| G66613 | NA | non-coding | upstream | 100547 | 37013981 ~ 37019796 (-) |
| G66685 | NA | non-coding | upstream | 354348 | 37267782 ~ 37268223 (-) |
| G66740 | NA | non-coding | upstream | 581689 | 37495123 ~ 37495370 (-) |
| G66786 | NA | non-coding | upstream | 823329 | 37736763 ~ 37739197 (-) |
| G66817 | NA | non-coding | upstream | 986033 | 37899467 ~ 37899878 (-) |
| AMCG00020911 | NA | other | downstream | 626630 | 36260993 ~ 36282529 (-) |
| AMCG00020900 | NA | other | downstream | 922447 | 35975764 ~ 35986712 (-) |
| AMCG00020887 | tmem127 | other | downstream | 1089329 | 35813873 ~ 35819830 (-) |
| AMCG00020876 | NA | other | downstream | 1212190 | 35694968 ~ 35696969 (-) |
| G66279 | NA | other | downstream | 1216699 | 35650980 ~ 35692460 (-) |
| AMCG00020923 | whsc1l1,LOC107720716,LOC107687514,LOC107705078 | other | upstream | 106577 | 37020011 ~ 37045939 (-) |
| AMCG00020922 | NA | other | upstream | 148161 | 37061595 ~ 37067805 (-) |
| AMCG00020943 | NA | other | upstream | 718343 | 37631777 ~ 37632576 (-) |
| AMCG00020970 | NA | other | upstream | 2134270 | 39047704 ~ 39104867 (-) |
| AMCG00020997 | atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 | other | upstream | 3643696 | 40557130 ~ 40640339 (-) |
