AMCG00020919


Basic Information

Item Value
gene id AMCG00020919
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37047642 ~ 37058036 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020919
GTTACACAGCCTGGGCCCAGCACGACCCGGGGGTGTCGGATTCGCTCAGAGACGGGCCGGGAAGCCTCGTCGTCGgtgggtttttatttattcctgcCCGGTGTCGCTTCGCGTCTCCAGCGTCTCACCGACCGGGCGGTCCTCGGTCTCATAGACGAGGGACAGTGACGCCTGGCTCGGCTGCAGCTCGGCGCACAGACGCACGGGGCTGTTGTTGTGTCTCTCCCCCACATCCAGCCTGTGTGTCCGGCGCGTCCAGTGACGGCTGTCTGGCACAGTGGAAAGGTTTGGGAGACCGGGTTTGCCGTGGGACGTCGGTGGGAGCGGTTGTGGggctttctgtgtttgtttctcacaAACGAGGCACTTTGTTGTAAGTTTGGATCTGTCAACGGCGAGGTATTTTTAACGGTGGCCTTCACGGGACAATCTGGCCGCGTATCACTCCGTTGGAATTCGTGCCGGTGGCAGAATTGGACCGGGTCGCGTAGGGCCTAACTGGTTCGTCACTTTTACACGGAGAAGACGATGGCAGCTTTTAGTTCCCACGTTATCCTGGCTGTGACCAGATCCAGGGGAACGTGCCTGCTCATACAGAGACCCCACTGCCCTTCTCTATCCCACTTTCACGTGGAGCATGTGAACAGGACTTGCCTCACCCAAAGGGCTGTGAATTCGGCTTATACTTCCTGCGCTCTGCCCCACGGGAGGACCAACTACCTCTCAGCCCGGTGTCTGCATGGCTCCCGCTGCTGGCTCCAGGATGCTAAAACGGAGCCCGGGTCAGGCGCCTCCGAGAAACAGGACTCCCATCCCGcatctcctgctgctgctcccactcccactcccgcTCCCACCTCTACCTCCCCTACGGTTGACATCGGAGAGAAAGCAGTGGTGAAAAAGACCCTGAGACAACGAGTGCTGGACGAACTAAAGCATTATTATGATGGATTCAGACTTTTGGGTATCGACACCAAGATCGCCGGCAGGATGGTTTGGAGGCTACTGCATGGACAGCAGCtcaccaggagagagaggagaaggCTGATGCGGACCTGTGCTGACCTGTTCCGCCTAGTCCCCTTCACCGTTTTCATCATCGTCCCATTCATGGAGTTCCTGCTGCCTGTATTCCTGAAACTGTTTCCCGAAATGCTGCCGTCTACCTTCGAGACGGAATCCAAGAAGGAGGAGAAGCAGAAAAAGGGCCTGGCAGCCAAATTGGAGCTGGCGAAATTCCTTCAAGAGACCATTGCGGAGATGGCCAGGCGAAACAAAGCACAGAACGCAGACGAAACGCAGAAATTCTCAACGTATGTGCAACAGCACCTGGAGCGCCCCCAGCTGGTGGCCCTGTGTAagctgctggagctgcagcCCATCGGCACCAACAACCTGCTGCGCTTCCAGCTCATGCTCAACCTGCGTAACATCAAGGCAGACGATGAGATGATTGCGAGGGAAGGCGTGGCGGCCATGAGTGTGTCTGAGCTGCAGGCCGCGTGCCGAAGCCGGGGCATGAGGTCGCTGGGGCTGACAGAAGATCAACTCCGGCAGCAGCTGCAACAGTGGCTGGACCTGCACCTAAAGGAGAACGTGCCGCCCTCTCTCCTACTGCTGTCCCGTGCCATGTACCTGACGGACATCATGCCAAAGCCGCCTGTGGTGCCACCTGTACCAAAGCTGGAAaccattattcctcctgtGGCTGAAAGTACTGAACCCACAGCCCCAGAGAAAACACTGCCTACCCCTCTGGAAATTCTGGTGGACCCGGCGCCAGTCATTCAGGCCATAAAGGGTGAAGAAATCTTGGAAAAACCCTTGAAAGCTGCTACAGAGGCATCTCCAAAAACTGCTCCCCTGCCTCCAACGAAAGCTGCTCCATCAACCCAGCAAGCCAAAGCCAGTGCCAATGGGATCTGAAGGTGGAGTCCGAGGGGCATTCTGGGAAATTCTCTTGCCCCTCAGACGAGGAGGATCCCCGCAGAAGGAGAACAGTGTGGGATGTACCCCGCCAAGGTGCTGCTGTGGAAGCAAAGCATTCTGTGCTGTATTTCTGctcacccccctccccaaaatGCAGTTCACATCGCATCCCTGCCAGCAGCTGGGATTCTTTTTTAACGGTTCACCGCCAAGCAGAAGCCAGGTcccaggacagacagacagacagacggacaggaGCACCGCTGCCCACCTGAATTCACTCCAGCTTCGCATCCGTCCATGAGAAGCAGCCCAGCGTAAACCAGGAATACAGCGGGGGGGGGTTCTGAAAGTGCAGCTTTTTATTTCTAATGGTGATGGTGTTGAAAGCCCAAACACTCCTGCTTTGGTAACTGTACCAGCCAGTTCCCGAGAGACGAGGACAAAAAGGACAATTTAgacccttttttgttttgttttcacccCCAAAAAGTGTTAGTTGGTGTTTGAATATCAATCcctctttcaatttgaaattgcCGTTCATAGATAGAAACACTCCGCTATGAGTTTTCATGTGTATTATTGTGAGGGAATGGCAGCTTTCAGTTAAACTGCTGACAAACTAGTGCAAGTCTCTCACTTCTGGTATTGGTGCTGCTCGgtgtatatttgtaaatatgctGTATTTGAAATCGTAAAGATGGGCAGCGGTGCTTTGGGTGGCCCCCCCACAGTGACTGGACGCTGTTGTTGATGCTCATCAGGCCTTTGAGTGTCGCTGCTGACCCATGCGTCACGTGATAATCATCATTCAGAGGAGTGTGGGATGATGTCATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020919 True 2773 mRNA 0.55 11 37047642 37058036

Neighbor

gene id symbol gene type direction distance location
AMCG00020914 NA coding upstream 178064 36851495 ~ 36869578 (+)
AMCG00020909 mak16 coding upstream 806422 36234933 ~ 36241220 (+)
AMCG00020910 rnf122 coding upstream 821293 36205330 ~ 36226349 (+)
AMCG00020908 NA coding upstream 843782 36196447 ~ 36203860 (+)
AMCG00020907 dusp26,LOC102218034,LOC106904628 coding upstream 852799 36187749 ~ 36194843 (+)
AMCG00020925 NA coding downstream 36250 37094286 ~ 37112090 (+)
AMCG00020926 NA coding downstream 100616 37158652 ~ 37165302 (+)
AMCG00020930 LOC106580522,LOC104937675,LOC107673422 coding downstream 125628 37183664 ~ 37185928 (+)
AMCG00020931 loxl2,LOC106580522 coding downstream 145952 37203988 ~ 37226869 (+)
AMCG00020941 NA coding downstream 571288 37629324 ~ 37630094 (+)
G66528 NA non-coding upstream 241065 36806320 ~ 36806577 (+)
G66524 NA non-coding upstream 322513 36724894 ~ 36725129 (+)
G66395 NA non-coding upstream 973221 36004619 ~ 36074421 (+)
G66342 NA non-coding upstream 1190614 35798710 ~ 35857028 (+)
G66602 NA non-coding downstream 15643 37073679 ~ 37074634 (+)
G66696 NA non-coding downstream 230478 37288514 ~ 37288841 (+)
G66700 NA non-coding downstream 243212 37301248 ~ 37301598 (+)
G66701 NA non-coding downstream 246013 37304049 ~ 37309335 (+)
G66739 NA non-coding downstream 437085 37495121 ~ 37495381 (+)
G66551 NA other upstream 130206 36914815 ~ 36917436 (+)
G66506 NA other upstream 791131 36254699 ~ 36256511 (+)
G66362 NA other upstream 1139240 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 1297196 35747156 ~ 35750446 (+)
G66149 NA other upstream 1882657 35163813 ~ 35164985 (+)
AMCG00020942 NA other downstream 509000 37567036 ~ 37575856 (+)
AMCG00020954 NA other downstream 1059026 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 3263077 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 3497930 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 3993436 41051472 ~ 41062527 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location