AMCG00020929


Basic Information

Item Value
gene id AMCG00020929
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37173840 ~ 37175240 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020929
ATGACCAATGAAACCTTGCTCTCAGAGACTGCTGGCAGCAAGATCCAAGGGATTTTAACTCAATCGCTGACCGCCTGCCTGCTCTTCCTGTTCATCTTCAGCACTCTGCTGGGCAACACTCTGGTGTGCGCCGCCGTCGTGAAATTCCGCCACCTCCGTTCCAAGGTCACCTATGTCTTTGTGGTCTCTCTGGCCGTCTCCGATCTCTTTGTGGCCACCTTGGTCATGCCTTGGCGGGCTGTGGCCGAGGTGGCAGGGTTCTGGCCGTTTGGCAGCTTCTGCAACATCTGGGTGGCTTTCGACATCATGTGCTCCACAGCTTCCATTCTCAACTTGTGCATCATCAGCGTGGACCGCTACTGGGCCATCGCAAGCCCTTTCCGCTACGAGCGCAAGATGACCCGTCGGGCAGCATTGGTCATGATTGGTGTGGCCTGGACCCTCTCAGTTCTCATCTCTTTCATCCCAGTGCAACTGAGCTGGCACAAAGCCGAGGGGAGCCCCCCTGAGGTTGGATCACCTCCCCGGATCTCCTCTGAAAACTGCGACTCCAGCCTGAATCGCACCTATGCCATCACCTCCTCCCTGATCAGCTTCTACATCCCAGTGGCCATCATGATTGTCACTTACACCCGCATCTACCGCATAGCTCAGAGACAGATCCGCCGCATCTCCAGCCAGGAGAGAGCAGCTGAGCATGCCCAGAGCCGCAGGGCCGACGGATGTCTACCCGACACTGGCCTGAAGAGCACTTTCAAGAAGGAGACCAAGGTCCTCAAAACCCTCTCTATCATCATGGGGGTCTTCGTTTGCTGTTGGATGCCCTTCTTCATCCTTAACTGCATGGTTCCTTTCTGCAACCCAGGCATCCACCACGCTGAACATCTCCCTTGTGTGAGCGAGACCACCTTCGACGTTTTTGTCTGGTTCGGTTGGGCCAACTCTACCCTCAACCCCATCGTCTACGCCTTCAATGCTGATTTCCGCCGGGCCTTCGCTGCCCTGCTGGGCTGTGGGCGGCTGTGCTCCAGCAACATAGTGGAGACCGTGGACTTCAGTAATGAATTGGTGTCCTACCACCATgacaccaccaacaacaacaaggaaATCCGGACCCTCAGCTACCCCTACCTCCTTCCCCATGTCGTCAGGCAGCCAAGTGAAAAGGAGGTCTCTTTTGATGACGTGTCCCAGATCGCCCAAACCTCTTGCAGGGAGGAGTGTGGCTTCAAGCATGTGGACGGCCTGCCAGTCATCGTCCACACGGACTGCGAGACAGATGTGTCACTGGACAAGATCACTCCTTTTACCCCAGCAGAAAAACCTCCGGCAGGAGATTTCTGCACAAAGAGCCATCTGACCCACGGGCAGAGACCAAGCACTGGTTCTGCGATATTATGA

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0004952 dopamine neurotransmitter receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020929 True 1401 mRNA 0.56 1 37173840 37175240

Neighbor

gene id symbol gene type direction distance location
AMCG00020927 NA coding downstream 18553 37148494 ~ 37155287 (-)
AMCG00020928 NA coding downstream 50981 37115543 ~ 37122859 (-)
AMCG00020920 NA coding downstream 99263 37069515 ~ 37074577 (-)
AMCG00020921 plpp5,LOC107553701,LOC107678050,LOC107720719 coding downstream 161605 37000425 ~ 37012235 (-)
AMCG00020924 NA coding downstream 175084 36974409 ~ 36998756 (-)
AMCG00020932 NA coding upstream 65799 37241039 ~ 37282869 (-)
AMCG00020933 entpd4 coding upstream 128725 37303965 ~ 37323700 (-)
AMCG00020935 NA coding upstream 149974 37325214 ~ 37337254 (-)
AMCG00020934 lgi3,LOC106579864 coding upstream 162671 37337911 ~ 37356170 (-)
AMCG00020936 LOC106579865,LOC105014025 coding upstream 223059 37398299 ~ 37454868 (-)
G66613 NA non-coding downstream 154044 37013981 ~ 37019796 (-)
G66536 NA non-coding downstream 303685 36869417 ~ 36870155 (-)
G66535 NA non-coding downstream 322204 36851070 ~ 36851636 (-)
G66527 NA non-coding downstream 426097 36747515 ~ 36747743 (-)
G66499 NA non-coding downstream 936913 36235772 ~ 36236927 (-)
G66685 NA non-coding upstream 92542 37267782 ~ 37268223 (-)
G66740 NA non-coding upstream 319883 37495123 ~ 37495370 (-)
G66786 NA non-coding upstream 561523 37736763 ~ 37739197 (-)
G66817 NA non-coding upstream 724227 37899467 ~ 37899878 (-)
G66851 NA non-coding upstream 1005797 38181037 ~ 38181274 (-)
AMCG00020922 NA other downstream 106035 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 127901 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 891311 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 1187128 35975764 ~ 35986712 (-)
AMCG00020887 tmem127 other downstream 1354010 35813873 ~ 35819830 (-)
AMCG00020943 NA other upstream 456537 37631777 ~ 37632576 (-)
AMCG00020970 NA other upstream 1872464 39047704 ~ 39104867 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 3381890 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 4420840 41596080 ~ 41602270 (-)

Expression


Co-expression Network