AMCG00020937


Basic Information

Item Value
gene id AMCG00020937
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37524705 ~ 37527768 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020937
TGGCTAGTGACGTGTCAGCTGACCGTGTTTGCGGAAGTGCATTTCGTACAAAGCGGTGGGACTGTTTCGGTCTGGAGAGACAGATATTCCTGCACTGCTGAAGACTTGCACACCTCTGCCACCCTGATCCCGGAGCATGGCATCATCACACTGTTCCTGCTGCACAGATGCCAACCTTGCATCCCCCAGTACCCATCAGACTCTGGATGAGATGGACTTTGAAAGAGgCATATGGAGTGCCGCTCTTGACGCAGACCTGGAGAGACTTCGAGCCTTCCTACGCAAGGGCACAGACCCCAACCTGAGGGACCAGGCTGGCTACACTGCACTGcACTATGCCAGTCGCACTGGCAGTGAATCTGCCTGTTCTCTGCTGCTGGACCATGGCGCGTGTGCCAACCCCCGGACCAGGGGCGGGGCCACTCCCTTGCATCGCTCTGCCTACTGCGGGCATGTGGGCGTGGTCAGACTGCTCCTGAATCGTGGGGCAGACCCTCAGTTGTGTGACGATGATGGCTCCTCCCCTCTGCACAAGGTAGGCTGCAGAGCAGGGCTGTGAGGACGTGTGTGCGCTGCTTGTCCAGCACTGCCCCTCCCTCAAGAAAGGGACAGACAAGAGGGCCCGCATCCCCCAACAGCTGGTCCAGCAGGAGGGGCATCTGAAGGAGCTCCTGAGGCCGTCTGAAAACACCCCCTGACTCCCTTTAACCCCAGCAAGAGACACCCGACACGACCATCAAGACAATCTGCTTCTTTTAACAAAGTGGGGGTCGAATCCAGTTCAGTTCCAGAGTTGCAGAGCTGGAAACAGAACTGATTGTTGCATTCAGGTGGAATTGATCCGACCCCCAGGTCAGTGAGGATTAgtatttacagtgtttttgtatCCTGCAATTGTACAATTAGTGTACAGGAACCCCATGAGCCCTGAAGTGCAGATAAACCTTCTTAGGAGATGTCGTAACATCCTTCACATTTCCTACACATGTATTCATTGCAGTTGAAAAGTATTTATGAAGGTATCAAGAATTATACGGGACTCATGATTCATGTTGAACACGTGGACTTAGAATGTCTTGGAATAGCttcagtgttattattactaatgcATTTGGCAGCTAGATTTTACCTTTGTAACTTAAAAagtattcagatattaatttTGGGGGAATAAGTCTGtaattattgctgtttttcattctttcattaaAGCACAGAAGATCATCTGTTTTTTGGAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020937 True 1241 mRNA 0.50 5 37524705 37527768

Neighbor

gene id symbol gene type direction distance location
AMCG00020936 LOC106579865,LOC105014025 coding downstream 69837 37398299 ~ 37454868 (-)
AMCG00020934 lgi3,LOC106579864 coding downstream 168535 37337911 ~ 37356170 (-)
AMCG00020935 NA coding downstream 187451 37325214 ~ 37337254 (-)
AMCG00020933 entpd4 coding downstream 201005 37303965 ~ 37323700 (-)
AMCG00020932 NA coding downstream 241836 37241039 ~ 37282869 (-)
AMCG00020939 kctd9,LOC101468158,LOC102794741 coding upstream 6987 37534755 ~ 37539399 (-)
AMCG00020938 acty,actr1,LOC106585571,LOC105889177,LOC108425179 coding upstream 17856 37545624 ~ 37549905 (-)
AMCG00020940 NA coding upstream 28812 37556580 ~ 37566120 (-)
AMCG00020948 gfpt1,LOC103362312,LOC108426669,LOC102792631 coding upstream 244383 37772151 ~ 37814897 (-)
AMCG00020947 nfu1,LOC101072203,LOC107752565 coding upstream 288126 37815894 ~ 37821863 (-)
G66740 NA non-coding downstream 29335 37495123 ~ 37495370 (-)
G66685 NA non-coding downstream 256482 37267782 ~ 37268223 (-)
G66613 NA non-coding downstream 504909 37013981 ~ 37019796 (-)
G66536 NA non-coding downstream 654550 36869417 ~ 36870155 (-)
G66535 NA non-coding downstream 673069 36851070 ~ 36851636 (-)
G66786 NA non-coding upstream 208995 37736763 ~ 37739197 (-)
G66817 NA non-coding upstream 371699 37899467 ~ 37899878 (-)
G66851 NA non-coding upstream 653269 38181037 ~ 38181274 (-)
G66872 NA non-coding upstream 750226 38277994 ~ 38278539 (-)
G66920 NA non-coding upstream 1167224 38694992 ~ 38697487 (-)
AMCG00020922 NA other downstream 456900 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 478766 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 1242176 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 1537993 35975764 ~ 35986712 (-)
AMCG00020887 tmem127 other downstream 1704875 35813873 ~ 35819830 (-)
AMCG00020943 NA other upstream 104009 37631777 ~ 37632576 (-)
AMCG00020970 NA other upstream 1519936 39047704 ~ 39104867 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 3029362 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 4068312 41596080 ~ 41602270 (-)

Expression


Co-expression Network