AMCG00020943


Basic Information

Item Value
gene id AMCG00020943
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37631777 ~ 37632576 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020943
ATGGCCATCAGCCCCAACCGACGCTACCTGGCCGTGTCTGAGACGGGGGACAAGGGCACCATCACCGTGTATGACCTAAAACACGAGCAGCACCAGAAAAAGAAGGTCCTGAGTGCCGGGGACTTCCCAACGCAGGAGTTCGTCTCCCTGGCCTTCTCCCCGGACTCTAAGTACCTTATCGGCCAGTCGGGGGCCCCAGACTGGACCCTCTACTACTGGATGTGGGAGAAGCACAAGGTGATGGCCTCGGTGAAGACCAGCATCACGACCAGTCCTGTCTATCAGGTTAGCTTTAACCCTCAGAACAACACGCAGATCTGTGTCAGTGGCAGGGGGGTGTTCAAGCTGTTCCACTACGCAGAGGGAGCCTTCAAACAGTCCAACAGCCAGAAGCTGGATGTGGGCAACGTCCTGTCCCACACCTGGCTGTCACACAAGCAAGTCATCCTCGGCACGGAGACCGGGAGGCTCCTGATGATGGAGGGTGGAGATCTGCGCTGCGAGATGAGCGTGGCTCCGAAGCCCACCACCAGAGACAGCCACAGGTACCCTACAGACCATATACACTGA
>TU83462
TATTGATGGTCAATATttaacaagtaaacaaaaaaactaaaaccccCTACAACAGGCACGGAGAGAAGTCAGGGCACGAAGGCCATGGCCATCAGCCCCAACCGACGCTACCTGGCCGTGTCTGAGACGGGGGACAAGGGCACCATCACCGTGTATGACCTAAAACACGAGCAGCACCAGAAAAAGAAGGTCCTGAGTGCCGGGGACTTCCCAACGCAGGAGTTCGTCTCCCTGGCCTTCTCCCCGGACTCTAAGTACCTTATCGGCCAGTCGGGGGCCCCAGACTGGACCCTCTACTACTGGATGTGGGAGAAGCACAAGGTGATGGCCTCGGTGAAGACCAGCATCACGACCAGTCCTGTCTATCAGGTTAGCTTTAACCCTCAGAACAACACGCAGATCTGTGTCAGTGGCAGGGGGGTGTTCAAGCTGTTCCACTACGCAGAGGGAGCCTTCAAACAGTCCAACAGCCAGAAGCTGGATGTGGGCAACGTCCTGTCCCACACCTGGCTGTCACACAAGCAAGTCATCCTCGGCACGGAGACCGGGAGGCTCCTGATGATGGAGGGTGGAGATCTGCGCTGCGAGATGAGCGTGGCTCCGAAGCCCACCACCAGAGACAGCCACAGGT

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis
ko04927 Cortisol synthesis and secretion

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020943 False 570 mRNA 0.58 2 37631777 37632492
TU83462 True 631 TUCP 0.56 2 37631800 37632576

Neighbor

gene id symbol gene type direction distance location
AMCG00020940 NA coding downstream 65657 37556580 ~ 37566120 (-)
AMCG00020938 acty,actr1,LOC106585571,LOC105889177,LOC108425179 coding downstream 81872 37545624 ~ 37549905 (-)
AMCG00020939 kctd9,LOC101468158,LOC102794741 coding downstream 92378 37534755 ~ 37539399 (-)
AMCG00020937 NA coding downstream 104009 37524705 ~ 37527768 (-)
AMCG00020936 LOC106579865,LOC105014025 coding downstream 176909 37398299 ~ 37454868 (-)
AMCG00020948 gfpt1,LOC103362312,LOC108426669,LOC102792631 coding upstream 139575 37772151 ~ 37814897 (-)
AMCG00020947 nfu1,LOC101072203,LOC107752565 coding upstream 183318 37815894 ~ 37821863 (-)
AMCG00020949 LOC103357666 coding upstream 210324 37842900 ~ 37892340 (-)
AMCG00020953 NA coding upstream 335596 37968172 ~ 38030972 (-)
AMCG00020952 NA coding upstream 462526 38095102 ~ 38095590 (-)
G66740 NA non-coding downstream 136407 37495123 ~ 37495370 (-)
G66685 NA non-coding downstream 363554 37267782 ~ 37268223 (-)
G66613 NA non-coding downstream 611981 37013981 ~ 37019796 (-)
G66536 NA non-coding downstream 761622 36869417 ~ 36870155 (-)
G66535 NA non-coding downstream 780141 36851070 ~ 36851636 (-)
G66786 NA non-coding upstream 104187 37736763 ~ 37739197 (-)
G66817 NA non-coding upstream 266891 37899467 ~ 37899878 (-)
G66851 NA non-coding upstream 548461 38181037 ~ 38181274 (-)
G66872 NA non-coding upstream 645418 38277994 ~ 38278539 (-)
G66920 NA non-coding upstream 1062416 38694992 ~ 38697487 (-)
AMCG00020922 NA other downstream 563972 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 585838 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 1349248 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 1645065 35975764 ~ 35986712 (-)
AMCG00020887 tmem127 other downstream 1811947 35813873 ~ 35819830 (-)
AMCG00020970 NA other upstream 1415128 39047704 ~ 39104867 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 2924554 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 3963504 41596080 ~ 41602270 (-)

Expression


Co-expression Network