AMCG00020946 (anxa4,LOC107583400,LOC107758674,LOC107689041,LOC107558128)


Basic Information

Item Value
gene id AMCG00020946
gene name anxa4,LOC107583400,LOC107758674,LOC107689041,LOC107558128
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 37906271 ~ 37922454 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020946
ATGCCTTTCCTTTCACGCTCCGGTCGACCGCTAACACAGCACAGGCTGGGGCCTCTTCccagggaggcagggagaccCAAGAGCCTGAAGATCATGTTACTGGGCAAACATGTCAGTCCCAGTGGCTCACtttgtgtgtccctgcagatcggCTCACGAGGAACAGTGACTGAGGCAGCGGGCTTCAATGCCGAGCAGGATGCGCAGAAACTGAGGAACGCCATGAAGGGTGCAGgcacTGATGAGGTGGCTATCATTGACGTCCTGGCACACCGCACCATCGCCCAAAGACAGCTCATCAAGCATGCTTTCAAGACCTCTGTGGGAAAGGATCTGATCGACGAAGTCAAGTCGGAGCTGACGGGGAACTTCGAGAAGGTGGTGGTGGGGCTGCTGATGACTGCGCCGGTGTACGATGCCTACGAGCTGCACCATGCCATAAAGggTGCAGGGACAGACGAGGCCTGTCTGATTGAAATCCTGGCATCCCGAGACAACCAGGAAATCAAGGAGATTATTGCCACTTATAAGAAAGAGTATGGTAAGAGTCTGGAAGATGATATAATCTCTGACACATCGGGGATGTTCCAGAGGGTCCTGGTGTCTCTTCTCACGGCCGGGCGTGATGAGAGCACCAAAGTGGACAATGTACTGGCTGTGCAGGACGCCAAGGACCTCTACCAGGCCGGGGAAGCCCGCTGGGGCACCGATGAGGTGAAATTcctgactgtgctgtgtgtgcgcAACAAGCAACACCTGCTTAAAGTGTTTGAAGAGTATCATAAGATCGCCGGCCGGGACGTCGAGGACAGCATTAAGAGGGAGATGTCTGGCACTCTGGAGGATGTCTTCCTGGCTATAGTGAGAAGCATCAAAAGCAAGCCAGGCTTCTTTGCTGAGCGTCTATACAAATCCATGAAGGGCCTCGGCACCACAGACAGCATCCTGATCCGAGTGATGGTGTCCCGGGCCGAGATCGACATGCTGGACATCAAGGCCCAGTTCCTGAAGATGTACGGCAAAACCCTGTTCTCCTTCATCAAGgGCGACACCTCCGGGGACTACGGCAAAATCCTACTACAGCTGTGTGGAGGACAGTAGAAGACGCAGCAGTCCGAGTCCCGACCTCAGCCCCCTCGTCTCAGCATTTCCCTGGCCCCTGGCTTCCCCCCTGGCTTTTTTTGTACAGCACTTTTCAGTGTTCAGTCTTAACTGGATTCAAACACGTTTTTCTATACCGATTAAAGCTTACAGAAAACCTGTCTGTCCTTCCTGTGTCCGACTTTCACAGAATGCAATAGATTTCAAGGAAAACAATTCCTGAAATGgtatgttattataattattattgatagtcTATCcgtgggcagcagtgtggagtagtgttCAGGGCTCTAGACTGCTCAGCACGGTACTTTatccagaatgctccagtaaaaccccagctgtataaatgggtaattgtatgta

Function

symbol description
anxa4 Predicted to enable calcium ion binding activity. Predicted to be active in cytoplasm. Is expressed in several structures, including digestive system; endoderm; hatching gland; mesenchymal cell; and pronephric duct. Orthologous to human ANXA4 (annexin A4).

NR:

description
PREDICTED: annexin A4-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG:

id description
K17093 ANXA4; annexin A4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020946 True 1470 mRNA 0.52 13 37906271 37922454

Neighbor

gene id symbol gene type direction distance location
AMCG00020944 antxr1a,antxrl,LOC107553121,LOC107661337,LOC107562635,LOC106585598 coding upstream 189191 37712999 ~ 37717080 (+)
AMCG00020945 antxr1,LOC108236442,LOC103362313 coding upstream 220775 37669962 ~ 37685496 (+)
AMCG00020941 NA coding upstream 276177 37629324 ~ 37630094 (+)
AMCG00020931 loxl2,LOC106580522 coding upstream 679402 37203988 ~ 37226869 (+)
AMCG00020930 LOC106580522,LOC104937675,LOC107673422 coding upstream 720343 37183664 ~ 37185928 (+)
AMCG00020951 NA coding downstream 108274 38030728 ~ 38031966 (+)
AMCG00020950 NA coding downstream 183558 38106012 ~ 38111899 (+)
AMCG00020955 LOC108426712,LOC103357663,LOC100712487,LOC106536361 coding downstream 303792 38226246 ~ 38228104 (+)
AMCG00020956 NA coding downstream 337064 38259518 ~ 38275155 (+)
AMCG00020962 rhobtb2,LOC106585588 coding downstream 569258 38491712 ~ 38516342 (+)
G66801 NA non-coding upstream 43939 37837102 ~ 37862332 (+)
G66784 NA non-coding upstream 167083 37737732 ~ 37739188 (+)
G66780 NA non-coding upstream 255573 37650429 ~ 37650698 (+)
G66739 NA non-coding upstream 410890 37495121 ~ 37495381 (+)
G66701 NA non-coding upstream 596936 37304049 ~ 37309335 (+)
G66826 NA non-coding downstream 52349 37974803 ~ 38065665 (+)
G66861 NA non-coding downstream 318236 38240690 ~ 38244475 (+)
G66865 NA non-coding downstream 353536 38275990 ~ 38276294 (+)
G66887 NA non-coding downstream 502258 38424712 ~ 38425252 (+)
G66970 NA non-coding downstream 1088125 39010579 ~ 39010849 (+)
AMCG00020942 NA other upstream 330415 37567036 ~ 37575856 (+)
G66551 NA other upstream 988835 36914815 ~ 36917436 (+)
G66506 NA other upstream 1649760 36254699 ~ 36256511 (+)
G66362 NA other upstream 1997869 35867393 ~ 35908402 (+)
AMCG00020874 NA other upstream 2155825 35747156 ~ 35750446 (+)
AMCG00020954 NA other downstream 194608 38117062 ~ 38137073 (+)
G67108 LOC100846954 other downstream 2398659 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 2633512 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 3129018 41051472 ~ 41062527 (+)
G67323 NA other downstream 3675769 41598223 ~ 41602113 (+)

Expression


Co-expression Network