AMCG00020959


Basic Information

Item Value
gene id AMCG00020959
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 38278635 ~ 38300419 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020959
tctgtctgtctgtctgtctgcagggaCCTGCGGAACAATCTGATCAGCACTATAATGCCAGGTGCTTTCCAGGGTCTGACTGAGCTCCGGAAACTGGATCTCTCCAATAACCGCATTGGCTGCTTGACTGCTGAGATGTTCCAGGGCCTCACCAACCTCACCAAACTGAACCTATCTGGAAATATCTTCTCTTCTCTGGAGCCAGGGCTTTTCCAGGAGCTGTCTTCACTCAAGCTTGTGAGTTTTGAGTCGGAGTTCCTGTCCTGTGACTGCAGTCTGCAATGGGTCCCAAGCTTCTTCCGCTCCAGTGCTGCCCGTCTGTCGGAAGATACGCTGTGCGCCTATCCCAGCATCCACCAGGGCAAGCCACTGCGCAGCCTTCAAGAGAGTCAGCTGACCTGTGAAGGCCCTCTGGAGCtgcacactctctccctcctgcccTCCCTGCGCCAGGTGGTGTTTAAAGGAGACAGGCTGCCCTTCCAGTGTACTGCCGCCCTGCTGGACAAAACTACGTCGCTGCACTGGCGCCACAACGGCCAGGCAGTGACCTCCGATGCCGAGCAAGGCATCCAATTGGAGGACAGCATTCTGCATGACTGCACCCTGATTACCAGCGAGCTGATCCTGGGGAACGTGCGTGTGGAGGCCAGCGGGGAATGGGAGTGCATGGTGACCACAGGCCGCGGAAACACCTCCCGCAGTGTGGAGATTGTGGTGCTCGAGAACAGCGCCTCCTTCTGCACGGAGGAGAAAGTCACAAACAACCGCGGGGAGTTCAGGTGGCCCCGCACTCTGGCAGGCATCACCTCCTACCAGTACTGCCTGCAGTACCCTCACCCCGCCCTCACCATCAGCGGGGGTGCCGAGCAGAAGAGGGCCTCACGCTACTGTAACCGCTCAGGACGCTGGGACGAAGGCGACTACACCAAGTGCCTGTACAAAAACGACATCACCCGGGTCCTGCACACCTTTGTCCTGATGCCCCTCAATGCCTCCAATGCCCTGACACTGGCACACCAACTGCGCACCTACACTGCAGAGGCCTCTGGGTTCACTGACACTGTGGATGTCCTGTATGTGGCAAAGATGATGGAAAAGTTCATGGACTATGTCGGGGAGATCCGAGAGCTGtctgaggtgctggtggagATGGGCAGTAACCTGATGCAGGTGGACGAGCAGATCCTGTCCAGAGCCCAGCGCGAGGATGGGGCCTGCAGCTCCATTGTCCAGTCCCTGGAGACCATTGCCCGTCTGCAACTCCATGGCAACGCTCAGGACCTCTCCATGAGCTCCAGGAACATCGCAATGGAGGCCTACCTCATCAAACCATCCCACTACAGCGGTTTGACCTGCACAGCCTACCAGCGCCGTGAAGGGGTGGTTAGCTCCCTTGGTGGGGCAGAGGGCATGGAGCCACCCCAGGAACAGCAGTTGCGATTCCGCTGTACCACCGGCATCCACAACGCTTCCCTGCACTCCTTCCCTCTCAAAAACAGTGTAGCCTTGGCCTCAGTGTCAGTGCCCCCATCTCAGGTCCTGGTCGATGccccccctcactgtaagcTGCAGTTCCTGGCATTTCGCAGCGGCCGCTTCTTCCCGGTTTCAGGCAATGGCAGTACTCTGAAAGAGCAGAGCCGGCGCCGCAGCGTTAACACCCCAGTCGTCTTTTCTGGCCTGGACGGCTGCGACATGTGGAACCTGTCCGAGCCCATCACAGTCTCGCTGCGCCACTCCTCTCCGGGCTCCGATCCTGTGGCTGCCCACTGGAGCCTTGGGGGCGGGGAGGAGCATGGGGGCTGGAGCCAGGAGGGCTGCCAGCTGATGGACAGCGACTCCACTGTGTCCGTCCTGCGCTGCTCACATTTCAGCAACTATGCAGTTCTGCAGGAGCTGCCTGAGTTCCCCAGCCCCCCAGCAGCCCCTATGGAGGTCCTGCACCCCATGGTCTACACCTGCACTGCCCTGCTATTGCTCTCCGTCCACATCTCCCGCAAAAGCTGGCACACGCTCCTCAACATGTGCTTCCACATTGCCATGACGACAGCCGTGTTTGCGGGCGGCATCACCCTCACCAGCTACCCGATTGTGTGCCAGGCCGTGGGCATTGCTCTGCACTACTCTTCCCTGTCCACGCTGCTCTGGATCGGGGTCAATGCCAGGGTCATCTACAAGGAGGCAGTCTGGCAGACACCACGGCAACCTGAGTGCGAGCCTCCTGTGCCACCCACACAGCGGCCCATGCTCAGGTTCTATCTGATAGCCGGCGGGGTGCCCCTGATCATCTGTGGCATCACAGCAGCCGTCAACATCAACAACTATGGAGATGGCAGTCCTTTCTGCTGGTTGGTGTGGCGGCCCAGCCTGGGAGCCTTCTTTGTCCCAGCAGGCTTTGCGATGTTAGTGAGCTGGGTGTACTTCCTGTGCACTGTGTCTTGCCTGCGGAGTCGGAGGTTGCAGGGTCGCAAAGAGCTTCCTGAGTCATCATCTTCCAACTCCACGCCTATTCCAGAGAGCCAGCCCGCACTTGGAGGCAGCGCTAGCCTGCTCTCCACAGACTCTGTAATTGGAACAATGCATAATGGGACAGCCTTGGAGGACCAATATTCCTTGAAAGCCCAATTCTGGGCACTGGTGGCCACACACGTCCTTTATGTGGCACTCTGGAGCTGTGGGGCATTGGCAGTGTGgcagggggggcgggggcggcTGCTGTTCAGCTGCCTATATGGAGTGGCCACCACAGTGCTGGGTGTTTTCCTACTGGTGCATCACTGCCTGCGCAGGCTTGATGTGCAGGCTGCCTGGCTGGGGTGCTGCCCTGCTTACCGCCGCTCCCACCCCATGCCAGCCTACCTGCATCCTTGTGCCGCTGGGGCACAAACTAATGTGTCAGAGCATGGGTCCCAAATCTTTGTGGGCTGTCTCCCCCCAGGGGAACCACACAACTCCTCTTCTGCCCGGTCCTCATCAACCCCCAGTGGTACCAGTGGTGTCAGCAGTCTGTCTGGCCCAGGACCCTGCAAACTCACCAACCTGCTGCATGTGGCACAAGACAGTACCTACAACGCCACCCGTGCCCCTGCCGGtgccaacaccaacaccaacaccaacacaagCACCAGCACTGACAACAACATTAAGTACTCCAACAATAACCTGGCACCAGCGATAGTTTCTTCAGCCCTGGGGCAACCCCAGAGACGAAAGACAGGCAGCAGGACTAAGCAAGGGACTTCTGCTGCCCAGTATCACcacagaggggaggggagggggcacTACCGCCTGAAGGCACTGcggggtggaggaggaggaggcagtgTGGGTGCATTAGGCCCCCCAGGTTTGGAACAACTCAACCCACCCCAGCCTAGCCACAAACACCACTCCAGTGAGAACGGGAGTGTCCACAATAGCCACTCCGAGAGCCGCACCAGCCCAATGGCCAACGGGCAACGGATTGGAGAGGCTGCTGCCACCAGCCCCTCAGAGGGCAGCGACGCAGGTAGCAGTGGCAGCCGGCAGAAGCCTTTCCCCCTGCTTCCCTCTGTGGCCAGCAGGGTGGCGCTGCAGGGTGCTCAGCGGCGCAGTGCTAGCCGGGACAATCTAAAGCTGGCAGCAGCGGCAGAGAAGGAAGCCAAGCGCAGCTCTTTTCCACTCAACCCCGGCAACTCCATGTCTGCACCCGTGACCAGTCAGAACGGGACCTTGAAGGGCTCAGGGTTGGAGCTGGACTTGAGTGGGACAGACCACTCCCAGTGTTCGGTGGGCATGAAGAGTGGCATCTGGAAGAGTGAGACCACCGTCTGAATGGCAGCCCCCTTctgagagagggggatgaaCACAAGGAAAAGTTTCCAAAACTACAGGAGGGGATTCGGCCCACCTCGCTCCTCCATTACTGGTCACTTATTGAGGGTAGACTCTCATCAAGCTGTTTCTTGGAAACTCCCAGCCCAAGACACAAGAAGGATTAACCAATCAGAGATGGGCACTGGGGGAAGGTTTGCCAATGTCCTTTATAGCTGAGCGAAAACAGAGCAGATCTGGAAAGATGTTAATGGGTCAGTAGCCACAACATCGCAGATTACATAGCAGCCAAAACCTCATCTCTTTCTCTATGGAAAGAAGGGTCTCCAATTTTCAGACCATGGTTGACCTTCAGGTCTTGATCTTGGTGCCAAGTTTCAAGGTTGATTTTGAGGACCCCAAAACTATGTTTGTTCCAGACCAGAGATTCAGTTCTTATGACCTGTCCAAACACAGCCGGCAGATAAGGGATTTCTGTGGTCGCTCTTGCCGAATTGTCGGTGAAAGTGGTGCTAGGCAGCATAAACAGACAAATGTAATGCTccatccatttattttcctttaaccATAAGAGATCCTTAAGACTTTTTTAGAGAAATAAAGCTCTCTGAGTCTCTCTAAATATCTCATGGGCTTTTTGAAGACTCTCAGCAATCTGGGACTATGAACGTGATTAGATTACAAGACTGACTGAAAAGAGGGGAACACTTCtgtgttcttttaaaacaaattaggaAGAAATTAGGTAAACAGTTCATTTTCTATATACCCACCAAGTGACTCCCAAGACGTTAGAGGACATTAGACACAATCAGATGGACTATTGGACAAACAATAAAGCATGACAACCAGATTTTCAGAGGCTTGaaagacagatggacagactgTCACAGTGTCCATAACCAGGTGTCCCATACTCTGAGTAACTGACCGGCACAGGTTGGTGGGGAAGGTGGAGAAGCAGTACATACTATAAATCATGTTAAGATTGACTGTCTGGCTGATTTGCCTTTCTTTAATATGTGCTTTGTCGGTTACAGTCAGCAGCAGAACTTAACACAGTTCTTTCATGGGAAACAGGAAACGaacaatttcaaatgaatgtcaGAACACATAGCATAAGGGAAATCCAGCTCCCGTCCCATTAACGTTTAAAAGGGCAACAGTGGAACACTTTACTGGGACACTGTCAAAGAATAATGAGGCGTATTACACGGCATACTGCAGGGACtgcaatataatatgtataaaggAAAATCTAGACAGACTGCTTATGTATAAAGGTTATGGGGGAAGTGcatacttttttcctttttttttgttttttacaacaTTAGGGAATTTCCCTGGGATATATCTTCTCATTTGGGCTTTTTTCAAGCACTATTTTCTTCTGGAAATATTAGTTAGCTTGGACATTTTTTCATCAAGCAGAAGTCACAACACAAGATTACATGGGAGACATATTATAGGATACCGGAAAGCGCtataaatgtaagaaatgtaaGAATCAGCAGGAATATCACAAACCCAGCATCTTCATTTTGCCTTAGTTTTGACTGTGGGAGTGGATACTACCAAATCTGTGTTGAAAAGTCCCAGatctgacagacagacagacagacagaaaagaaaatctctCTTAAAACTTGACATTATccacaaacaaatcaacaaacactGTGTCACTCAACGACTATTAAGATGTTGCAGGACTATTCAGCTGATGTTAAGAGAGGTTCAGGCAGATCTGTAACGTGAAAGATTCTGTGGACTCCCCTTGTGTCATCAGGGCCAATAGAGGAATGTACGTATGGTACCCAGAGTTGATGTATCAGACACACATGTCCtaggaaatggaaaaaacacattgcactTACTAGACCATGTATTAATTTGTGCCTGTAGGATATTCTTAAAGAGgagaaatacacacagagagattcATGGATATTTGGAATCTAGGGGTTAGAGAACAGAAGGATAGGCAATATTTCCCTCACCCTCTGGGACAaaagacagacggacagacagacagggaggctGCCCTGGGCTGGGACGACACTTGGGAATTCATTTTAACTTGGCATCCGGAGAGAGGTTCAAATCTGAACTTTGCCTGCTTCACGGTCAGAAAGCAAGGCACTCCTTTCCCGAGGAATGTGGAAGTGGGCTTTGGTGAAATGTATGGGATTGAAGGAGCCAGACTGACCCCTTCTGGAGAGTATGTGAAATTGCATAACTGAACAAATGAGGAAAAGAAAGACTTGGAGATAAAATGAAGAgacctccacctcctccacaaAAAATAGGTCTTTCTGCACTTACTTAATTGTACCTCTAGGAGGCAGAAGAGGAAAAATAGAAGGGGGTGGGTTGATGCTTAGTATATTCAATGTGTAATGAGGTAGTTCATAATGGAAAATGAATCACTCCCACACCCAGCAGCTGACAAAGCATCACCGTTTGTGCACTACCGATGCAGGATTGCACAGAGGCTGTTTATCTGCAGCTGTGTCCGGCTCTGGTCCTACAGCGCCTGAAAGCTCTCCTGTTTTCCCTTCCCATCTCTGCCACCCACGGCCCTGAACTGAACTGCATTGCGTGTCGTGTTATGTTTTCCTTCTCACGTCCCTGATCTCATGTGGGCGGTGATTGAAAGATTCAAAACACAGAGCCAAGGGAAGAGGCAGGAGAGCAGGCTGGCTCAACACCTGGCAAAACAGATCCACTTCAACCATGAAATGAGTTGAATTAAGTGGCCGAGAGCTGGAGTGGAAAATCAAGAGAgcctgcagccctggaggaaCAGAGTTCGACAACTCTGTCTCATACAATAATACTGGCTTCGATGTTTACATTATAAGCATGCAACCTTATGCAATTTGTATAATCTCCTATACAGCTATAGTGTTTGCTCTTGTAGGCAATGTAGAGCACATGCAGTATTCTGTATTCcagtagaaaaatatttttcacctATAGGGATATAGCTGATTCTGCTCAGTACAGTATTTTACTACGTCAATGTGTTCAGGGAAAGTATTGTGCCAAAGAAAtgtttgattattgtttttgaatgatgCTCAATAGCTTCAACCTTTTGCAAAGCAAATCTATTGTGTAAATatcatattgtgtttgtttgtattaataacCATGTAATGTCAGTCTTGAAATCtcccttaaaaacaaacaaaaaaagaactaCAGTCTCTGATGGGGCTGTGAAAAGTATGAGGGAATCAATTGTTACACAATGTCAGGCTCTTCACCCAAGATTGTAGACTTTCTCGTGTACTCAAAACAGTCAGGAGAAGCTGGTGATAAGTTAGCACATATGGGCAGATTGCTTCATACAGTTAGTTGCTTTACTCTATGTTACCAGAATGTAGTGTGCTTATGTACAGAGAAGTGCATTCACAGAGTTTACAGGTTTTCCCAACAGCCACTTGTGCTGTGACATCCCATGAACAGTTTTGTATCTCTGTATGTCATGtgtatacatgtaatacatatatttattggatacatgtgtatgtgtgtatatttaagtagatatatatatttaaaatattgttgacTGTCCCACTCGGTATGGCTATCTCTGGAGAATCATGCTCCCAAACGCAACAGGTGTTCAATCAgtgttagtttatttaaaaaaatataatttaatcagGAGCACAGCCTTCAAGTAGTTaagcaagtttaaaaaaaaaaatacatgtgaaGCACAGGGTTTCAAACACCTGAGTGATTTTGATTTCCACctatggttttaatttttgaaGCCTTTGTTCAAAAcgtaatatatatttgtagcaATCATTTACATTATGTTTGATTGCAGGAAGGAAGACTCTAATCAAATTCcatatgattaaacaattgtcatgaaaaaaattaagcatttaCTAACTAAAGACAGAAGAGACTGACCTCccagaaagttatttttagaattgtttttaaaagtggttgaggtttctctctctctctctctctctc

Function

GO: NA

KEGG:

id description
K08461 ADGRA2, GPR124; adhesion G protein-coupled receptor A2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020959 True 7827 mRNA 0.50 17 38278635 38300419

Neighbor

gene id symbol gene type direction distance location
AMCG00020957 NA coding downstream 18634 38241746 ~ 38260001 (-)
AMCG00020958 NA coding downstream 39641 38232666 ~ 38238994 (-)
AMCG00020952 NA coding downstream 183045 38095102 ~ 38095590 (-)
AMCG00020953 NA coding downstream 247663 37968172 ~ 38030972 (-)
AMCG00020949 LOC103357666 coding downstream 386295 37842900 ~ 37892340 (-)
AMCG00020961 NA coding upstream 65708 38366127 ~ 38410862 (-)
AMCG00020960 NA coding upstream 127461 38427880 ~ 38458638 (-)
AMCG00020971 NA coding upstream 705011 39005430 ~ 39009794 (-)
AMCG00020974 NA coding upstream 794078 39094497 ~ 39096651 (-)
AMCG00020975 NA coding upstream 817016 39117435 ~ 39529985 (-)
G66872 NA non-coding downstream 96 38277994 ~ 38278539 (-)
G66851 NA non-coding downstream 97361 38181037 ~ 38181274 (-)
G66817 NA non-coding downstream 378757 37899467 ~ 37899878 (-)
G66786 NA non-coding downstream 539438 37736763 ~ 37739197 (-)
G66740 NA non-coding downstream 783265 37495123 ~ 37495370 (-)
G66920 NA non-coding upstream 394573 38694992 ~ 38697487 (-)
G66926 NA non-coding upstream 406853 38707272 ~ 38732240 (-)
G66927 NA non-coding upstream 423872 38724291 ~ 38772808 (-)
G66994 NA non-coding upstream 736741 39037160 ~ 39038645 (-)
G67010 NA non-coding upstream 775291 39075710 ~ 39092196 (-)
AMCG00020943 NA other downstream 646059 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 1210830 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 1232696 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 1996106 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 2291923 35975764 ~ 35986712 (-)
AMCG00020970 NA other upstream 747285 39047704 ~ 39104867 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 2256711 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 3295661 41596080 ~ 41602270 (-)

Expression


Co-expression Network