Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00020961 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 38366127 ~ 38410862 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K23353 | PDLIM1_2_3_4; PDZ and LIM domain protein 1/2/3/4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00020961 | True | 1161 | mRNA | 0.60 | 9 | 38366127 | 38410862 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00020959 | NA | coding | downstream | 65708 | 38278635 ~ 38300419 (-) |
| AMCG00020957 | NA | coding | downstream | 106126 | 38241746 ~ 38260001 (-) |
| AMCG00020958 | NA | coding | downstream | 127133 | 38232666 ~ 38238994 (-) |
| AMCG00020952 | NA | coding | downstream | 270537 | 38095102 ~ 38095590 (-) |
| AMCG00020953 | NA | coding | downstream | 335155 | 37968172 ~ 38030972 (-) |
| AMCG00020960 | NA | coding | upstream | 17018 | 38427880 ~ 38458638 (-) |
| AMCG00020971 | NA | coding | upstream | 594568 | 39005430 ~ 39009794 (-) |
| AMCG00020974 | NA | coding | upstream | 683635 | 39094497 ~ 39096651 (-) |
| AMCG00020975 | NA | coding | upstream | 706573 | 39117435 ~ 39529985 (-) |
| AMCG00020977 | NA | coding | upstream | 1235887 | 39646749 ~ 39666597 (-) |
| G66872 | NA | non-coding | downstream | 87588 | 38277994 ~ 38278539 (-) |
| G66851 | NA | non-coding | downstream | 184853 | 38181037 ~ 38181274 (-) |
| G66817 | NA | non-coding | downstream | 466249 | 37899467 ~ 37899878 (-) |
| G66786 | NA | non-coding | downstream | 626930 | 37736763 ~ 37739197 (-) |
| G66740 | NA | non-coding | downstream | 870757 | 37495123 ~ 37495370 (-) |
| G66920 | NA | non-coding | upstream | 284130 | 38694992 ~ 38697487 (-) |
| G66926 | NA | non-coding | upstream | 296410 | 38707272 ~ 38732240 (-) |
| G66927 | NA | non-coding | upstream | 313429 | 38724291 ~ 38772808 (-) |
| G66994 | NA | non-coding | upstream | 626298 | 39037160 ~ 39038645 (-) |
| G67010 | NA | non-coding | upstream | 664848 | 39075710 ~ 39092196 (-) |
| AMCG00020943 | NA | other | downstream | 733551 | 37631777 ~ 37632576 (-) |
| AMCG00020922 | NA | other | downstream | 1298322 | 37061595 ~ 37067805 (-) |
| AMCG00020923 | whsc1l1,LOC107720716,LOC107687514,LOC107705078 | other | downstream | 1320188 | 37020011 ~ 37045939 (-) |
| AMCG00020911 | NA | other | downstream | 2083598 | 36260993 ~ 36282529 (-) |
| AMCG00020900 | NA | other | downstream | 2379415 | 35975764 ~ 35986712 (-) |
| AMCG00020970 | NA | other | upstream | 636842 | 39047704 ~ 39104867 (-) |
| AMCG00020997 | atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 | other | upstream | 2146268 | 40557130 ~ 40640339 (-) |
| AMCG00021012 | NA | other | upstream | 3185218 | 41596080 ~ 41602270 (-) |
