AMCG00020964


Basic Information

Item Value
gene id AMCG00020964
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 38756735 ~ 38772815 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020964
ATGCTTGTGTCCTGTTCCCCATCGGAGCCAGGCTGTAAGGCAGCGCTTTGGTACAGCAGTGTCTTCCCCAGCTTGAACATGGCAGTGAAGCGCAGAGAGCAGGCAATGCAAGACTACAAGAGGTTGCAGTCCAAAGTGGAGAAATACGAGGAGAAGGAAAAGACCGGGCCGGTTATGGTCAAACTCCACCAGGTGGTGTACTTCACCGAAATGTACAAGATCTTCGACGAGCTGACGGAGCAGATCGACACGCCGGGACAGACGGACGAGCAGAGAGAGCGTGAAAATGAAGCCAAGCTGAACGAGCTGCGCGCCCTGTCCATCGTGGCGGACGACTGACCGCGGAGACGGCCGGGGGGGGGCGCAGCCCAGTCACGCAGTCCAAACAGACGCCAACACTAAACTGTGCCCCTTCTCCTTCTTTGACATTGCACTGGTAGAAGATTGTATGAACTCGAATCTCTCCTAGTCtcttatgattttattttattttattttaagtactcTACAGCAGGATTCTACCAATCCAGTCCTCAAAGGGCCAAATACTTTCTAGTTTTCAAGCTGCATTaactcttaattagttaattgaatgAATTACTCCTTTAACTGCACCAGTTTAATCCCTTTCCCAGGTCTACTCAGGGTTGAAGAAACCTATAAAACATGCTAGATTGTGGACTGGGCTTGATTGCGCTGCAGTGTGTCCTGGATTTCCCTTTTACGAGAAGGATGTTAGCCCAGGTAAATAAAAGAGTAAAggtctccttctccctctccccctttctctccccctttctctctctctctctctctctctctctctctctctctttcctggtCTACAACTTATTCTCCCTGATATACAAGACACTAAGCAGCCTTTTCAGGATGATTTGCCATATTCACTAAGCCATTAGTTCCATGCAGTTTTGTTTCTAGTattcaaaagcaaaaccaaGATTGTGACTTATACgtatagtttttattattaatctgtgcacaaaaatgtaaaatctaaacCCGATGGATTAATGTAAAAGTGCAGTAGTGGTTCGTTGTTTTAATGTTCTCCTCAGAAGCCATGTATGAACTTGACAAACGTTACGGATGAAAAGCTGAAGCAAGTGAAAAGCAGTTGcctatttaaatgtctttcctgtttttatatacatttatatttatttgttttattttgtgtttttctagatgttttttttcGTCCTCCTTGTTTTTCCCCCCAGGTTGTGTTTTTCAGCCACGGTATCTGCCTTTGTAAACCTGTATGTAATGGAGGGGGTTAtggattttaatgtatatatatctatattaaaaaaaaaaagtacaaattcaATA

Function

GO: NA

KEGG:

id description
K20120 BIN3; bridging integrator 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020964 True 1356 mRNA 0.43 3 38756735 38772815

Neighbor

gene id symbol gene type direction distance location
AMCG00020963 egr3,LOC106579855,LOC106585589 coding upstream 62230 38688163 ~ 38694505 (+)
AMCG00020962 rhobtb2,LOC106585588 coding upstream 240393 38491712 ~ 38516342 (+)
AMCG00020956 NA coding upstream 481580 38259518 ~ 38275155 (+)
AMCG00020955 LOC108426712,LOC103357663,LOC100712487,LOC106536361 coding upstream 528631 38226246 ~ 38228104 (+)
AMCG00020950 NA coding upstream 644836 38106012 ~ 38111899 (+)
AMCG00020965 NA coding downstream 12064 38784879 ~ 38812254 (+)
AMCG00020967 LOC108444561,LOC104924995,LOC105889889 coding downstream 107781 38880596 ~ 38885107 (+)
AMCG00020966 NA coding downstream 126130 38898945 ~ 38901605 (+)
AMCG00020968 LOC106579847,LOC108236587,LOC105014870 coding downstream 180670 38953485 ~ 38972284 (+)
AMCG00020969 bmp1,LOC103470513,LOC103145852 coding downstream 212062 38984877 ~ 39004829 (+)
G66887 NA non-coding upstream 331483 38424712 ~ 38425252 (+)
G66865 NA non-coding upstream 480441 38275990 ~ 38276294 (+)
G66861 NA non-coding upstream 512260 38240690 ~ 38244475 (+)
G66826 NA non-coding upstream 691070 37974803 ~ 38065665 (+)
G66801 NA non-coding upstream 894403 37837102 ~ 37862332 (+)
G66970 NA non-coding downstream 237764 39010579 ~ 39010849 (+)
G66995 NA non-coding downstream 276606 39049421 ~ 39049631 (+)
G67027 NA non-coding downstream 532482 39305297 ~ 39305587 (+)
G67048 NA non-coding downstream 976342 39749157 ~ 39749361 (+)
G67180 NA non-coding downstream 1797512 40570327 ~ 40571722 (+)
AMCG00020954 NA other upstream 619662 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 1180879 37567036 ~ 37575856 (+)
G66551 NA other upstream 1839299 36914815 ~ 36917436 (+)
G66506 NA other upstream 2500224 36254699 ~ 36256511 (+)
G66362 NA other upstream 2848333 35867393 ~ 35908402 (+)
G67108 LOC100846954 other downstream 1548298 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 1783151 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 2278657 41051472 ~ 41062527 (+)
G67323 NA other downstream 2825408 41598223 ~ 41602113 (+)
G67459 NA other downstream 3280115 42052930 ~ 42053675 (+)

Expression


Co-expression Network