AMCG00020965


Basic Information

Item Value
gene id AMCG00020965
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 38784879 ~ 38812254 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020965
ATGTACCGCGGTGGGGAGAGAGACTTCCAGACCTCTGCGCGGAGGATGGGCACCTCCCTGCTTTTCCAGCTGTCTGTTCACGAGCGCGAGCTGGACCTGGTGTTCCTGGACCACAGCTATGCCAAGCCCTGGAGCGCCCACCCTGACGCCAGCAGCGCCCGGCCGACGCGCATGCTGTTTGTCACACCCCGGCGCCAGCAGGACACCACTGTGGAGACGGACATGCCCCTCGACGTGGAGACGGTGACACCCACGCCCATGCCCCTGTACGACAACCAGAAGGCGCGGAGCGTGATGAATGAGTGCGAGAGGCACGTCCTGTTTGCCCGGACAGATGCTGACGCGCCCCCGCCTCCGGATGACTGGGAGGAACACGTCAACAAGACAGGCTGGTCCATGGCTCAGAACAAGCTGTTCAACAAGGTCCTGAAGGCCCTGCAGGCGGAGAGACAGGCACGGCTGGCCAACGAGGGGGCGTGTAATGAGCCGGTGTTGCGGCGCATCGCAGTGGACAAGTGTGCCAGGAAGGTGCGTCACGCGCTGGCCAGCATCAACTGGGACACTAAGCTCACCCAGTGGCTGCACACCACCCTGGTGGAGTCTCTCAGCCTGCCCATGCTGGCTGCCTACCTGGATGTCCTGCAGACCTTGAAGAGCAAGGTGCCCACGCTGATCGACAGGATGCTGTTGTCATCCTCGGTCAAGACAGGCGCTGCGGGCGCAGAGGCCCTGTCCCTCCTGCTCAAGAGGCCCTGGGACCCGGCGGTGGGCGTCCTGTCTCACAACAAGCCAAGCAAGCTTCCCGGTTCCCCTCTCATCCTGATTGCACCCTCCGGGCCAACCAATCCTGTCTTCTCCACCTCGCGGCGCCTACGCTTCTGGCAGTCGCAGCTGTCCTGCCTAGGGAAGGTCATCCCCATTTCCACTCACCTGGTGAACAGCGGGGCCAATGTGAGCCTCACTCAGTGCCTGGAACACATGGTGGGCGCAGTGAGGAGCAAAGTCCTGGAGGTGCACAGTCACTTCCCCCACAAGCCCATCATCCTGGTGGGCTGGAATGTGGGAGCGCTCATCAGCTGTCACGTCTCCTTGATGGAGTACGTCACTGCGGTGGTGTGTCTTGGATTCCCACTGTTCACTATTGATGGGCCCAGAGGGGATGTGGATGATCCGTTGTTGGACATGAAGACCCCAGTGCTGTTTGTGATTGGCCAGAACGCCTTGCAGTGTGGCGCGGAAGCCATGGAGGAGTTCAGGGAGAAAGTCCGGGCCGACAACAgtatggtggtggtggggggggcagatGACAAcctcagGATCAGTTCCACAAAGATGAAATCGGAAGGTCTGACCCAGAGCATGGTGGACAGGTGTATTCAGGATGAGATCGCCGACTTCCTGACTGGGGTGCTGACCCGGGCGGAGAGCCACAGCTCCAGCGAGCCCCGCGACCTGGACacggagaagaagaagaagccaCGGGAATCCCGTCGAGAGCTGCCCTTCGAGCTGGAGAGGAGCCGGCCGGCCTCCCCGGCTGTGCGCGTGCCCATCTCCCCCtcagggtcagagGATATGTCCAGTGTCTCCAGTAGCCCGGCCTCTAGCCCCAAGACCAAAGCCTCAACCCTCTCTCCAGCTCAGAAGTCCAGTCTGATCACAGCCACCCAGCTCCTCAAGACTCACATGCAGAGATCGGGGACTGTTCTCACTCACAAGCAGGCACAAGTGCCGGTGTCCAGTGACCAGACTGAGGGACTGGAGAGAGATGACCTGAGGGCACACCTGAAGAGGAGACAGACACCCAGCCCTACTCCAGCCAAGCCCTCCAAGAGAGCCAAGATCAAGGTCACCATCCTGTCCCACGGGGAGGCAACTGGTGGCATGAACAGTGCGGCAGCTCAGGAAGGAGCTGCAGGGAAGCCTCTGACTGTGACAGTGGGACAGTCTGTCCCTGGAGCCAAGGAGCTGTCTGGTCTTCTCACAGCACAGAGTCCCGGGGGGTCCGGCAGCGTGGCCCCCAGCACTTTCCACAGCCTGCAGACACGCATGGTGTCTGGGTCCTCCTCGCCTGTCCAGACACAGGCTCCCGCAGCTGCTCAAGGCACCCCCTCTGCCAGCAGCTTGCTCCAGGGCCTGAGCTTCAGCCTTCAGGAGATTGTTACCAAGTCTCCCAGCCTGCCCTCCACAGCTGCCAGTGTGGGGAACAGCACTCAGGTAACCTACACCTGGAACAGACCCACTGGACCACAGGCTCCAGGAATGAAGAGCCAGGGTCAGGTCCTGGCCGCTGTCACCACATGTAGCGGGACCCTGGTCAGAACCCTGCCTGTGGTCACTACAGGGGCAGGTGGCGGCACCAAAACCACACATATCCACCAGCTTCTCACCAATGGAGGCCTAGCCAAACTCGCCAGCAGCCTGCCCGGACTGGCGCACATCTCCAACCAGACAACCGGCCTCAAAGCACCCACCACAATCACAGTGACCTTAAGAGGGCAGCCCAACAGAGTGACCACCCTCAGCCAATCGGCAACAGGTGTCCCTGTGGTGAGACCCTCTGATATACAGGCTGTGTATTTTGAGAGCAACTGTGCCACTCAATGA

Function

GO: NA

KEGG:

id description
K16719 KANSL3, RCD1; regulatory NSL complex subunit 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020965 True 2607 mRNA 0.61 20 38784879 38812254

Neighbor

gene id symbol gene type direction distance location
AMCG00020964 NA coding upstream 12064 38756735 ~ 38772815 (+)
AMCG00020963 egr3,LOC106579855,LOC106585589 coding upstream 90374 38688163 ~ 38694505 (+)
AMCG00020962 rhobtb2,LOC106585588 coding upstream 268537 38491712 ~ 38516342 (+)
AMCG00020956 NA coding upstream 509724 38259518 ~ 38275155 (+)
AMCG00020955 LOC108426712,LOC103357663,LOC100712487,LOC106536361 coding upstream 556775 38226246 ~ 38228104 (+)
AMCG00020967 LOC108444561,LOC104924995,LOC105889889 coding downstream 68342 38880596 ~ 38885107 (+)
AMCG00020966 NA coding downstream 86691 38898945 ~ 38901605 (+)
AMCG00020968 LOC106579847,LOC108236587,LOC105014870 coding downstream 141231 38953485 ~ 38972284 (+)
AMCG00020969 bmp1,LOC103470513,LOC103145852 coding downstream 172623 38984877 ~ 39004829 (+)
AMCG00020972 atp6v1b2,LOC108277294,LOC106563054,LOC103034689,LOC105890663 coding downstream 200457 39012711 ~ 39027527 (+)
G66887 NA non-coding upstream 359627 38424712 ~ 38425252 (+)
G66865 NA non-coding upstream 508585 38275990 ~ 38276294 (+)
G66861 NA non-coding upstream 540404 38240690 ~ 38244475 (+)
G66826 NA non-coding upstream 719214 37974803 ~ 38065665 (+)
G66801 NA non-coding upstream 922547 37837102 ~ 37862332 (+)
G66970 NA non-coding downstream 198325 39010579 ~ 39010849 (+)
G66995 NA non-coding downstream 237167 39049421 ~ 39049631 (+)
G67027 NA non-coding downstream 493043 39305297 ~ 39305587 (+)
G67048 NA non-coding downstream 936903 39749157 ~ 39749361 (+)
G67180 NA non-coding downstream 1758073 40570327 ~ 40571722 (+)
AMCG00020954 NA other upstream 647806 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 1209023 37567036 ~ 37575856 (+)
G66551 NA other upstream 1867443 36914815 ~ 36917436 (+)
G66506 NA other upstream 2528368 36254699 ~ 36256511 (+)
G66362 NA other upstream 2876477 35867393 ~ 35908402 (+)
G67108 LOC100846954 other downstream 1508859 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 1743712 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 2239218 41051472 ~ 41062527 (+)
G67323 NA other downstream 2785969 41598223 ~ 41602113 (+)
G67459 NA other downstream 3240676 42052930 ~ 42053675 (+)

Expression


Co-expression Network