AMCG00020966


Basic Information

Item Value
gene id AMCG00020966
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 38898945 ~ 38901605 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020966
ATGAGCATTCTCAAAGCCATCCTGGCCATCGCCCTCATCTGGATGCTGGCCTGTGCGATCATGTGTCCCTCAGCCGCCATGTTAACAGTCATTCATCTGAAGGACACCTACATGATCCAGGACAACAAGACGTACCCACTCCTCACCTGCTTTGAAAACTGGCCTCAGCCGGAGATGCGGAAGCTCTACACCACCGTCCTGTTTGTACACGTCTACCTTGCACCCCTGGGGCTCATCAGCCTCATGTACTGCAGGATCGCCATGAAGCTCTTCAGCAACCTGGGGCCCGTGGGACGGGGCTCAGGGGAAGCACAGGTAGAGAGGACCTCTGTCTCCAAGAAGAAGGTGAAAGTCATCAAGATGCTGATTACTGTGGCTGTCCTCTTCATGGTCTCCTGGCTTCCCCTGTGGACCCTGATGCTCCTCACAGACTACGGGGACCTGAACGATGAACAGATCGACCTCCTCGGTGGCTACATCTTCCCCTTCGCCCACTGGCTGGCTTTCTTCAATAGCGGAGTCAACCCCATCATCTACGGATACTTCAACGAGAATTTCAAAAGGGGCTTTCAGGCAGCCCTCCCCTTCTGCTCCTTTGAAGTGACCCACCAGCAGGTTTACTCCCAAAGGACTCCCAGGGCTGGCAGGTTTTTCCTACACAACAAGGTCTCCAATGATGAATCCTTGGAAGCTACTCATGTCCTGAAACCAACCAATGCACAGGAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020966 True 729 mRNA 0.54 2 38898945 38901605

Neighbor

gene id symbol gene type direction distance location
AMCG00020967 LOC108444561,LOC104924995,LOC105889889 coding upstream 13838 38880596 ~ 38885107 (+)
AMCG00020965 NA coding upstream 86691 38784879 ~ 38812254 (+)
AMCG00020964 NA coding upstream 126130 38756735 ~ 38772815 (+)
AMCG00020963 egr3,LOC106579855,LOC106585589 coding upstream 204440 38688163 ~ 38694505 (+)
AMCG00020962 rhobtb2,LOC106585588 coding upstream 382603 38491712 ~ 38516342 (+)
AMCG00020968 LOC106579847,LOC108236587,LOC105014870 coding downstream 51880 38953485 ~ 38972284 (+)
AMCG00020969 bmp1,LOC103470513,LOC103145852 coding downstream 83272 38984877 ~ 39004829 (+)
AMCG00020972 atp6v1b2,LOC108277294,LOC106563054,LOC103034689,LOC105890663 coding downstream 111106 39012711 ~ 39027527 (+)
AMCG00020973 NA coding downstream 145655 39047260 ~ 39061811 (+)
AMCG00020978 NA coding downstream 713849 39615454 ~ 39617163 (+)
G66887 NA non-coding upstream 473693 38424712 ~ 38425252 (+)
G66865 NA non-coding upstream 622651 38275990 ~ 38276294 (+)
G66861 NA non-coding upstream 654470 38240690 ~ 38244475 (+)
G66826 NA non-coding upstream 833280 37974803 ~ 38065665 (+)
G66801 NA non-coding upstream 1036613 37837102 ~ 37862332 (+)
G66970 NA non-coding downstream 108974 39010579 ~ 39010849 (+)
G66995 NA non-coding downstream 147816 39049421 ~ 39049631 (+)
G67027 NA non-coding downstream 403692 39305297 ~ 39305587 (+)
G67048 NA non-coding downstream 847552 39749157 ~ 39749361 (+)
G67180 NA non-coding downstream 1668722 40570327 ~ 40571722 (+)
AMCG00020954 NA other upstream 761872 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 1323089 37567036 ~ 37575856 (+)
G66551 NA other upstream 1981509 36914815 ~ 36917436 (+)
G66506 NA other upstream 2642434 36254699 ~ 36256511 (+)
G66362 NA other upstream 2990543 35867393 ~ 35908402 (+)
G67108 LOC100846954 other downstream 1419508 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 1654361 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 2149867 41051472 ~ 41062527 (+)
G67323 NA other downstream 2696618 41598223 ~ 41602113 (+)
G67459 NA other downstream 3151325 42052930 ~ 42053675 (+)

Expression


Co-expression Network