AMCG00020970


Basic Information

Item Value
gene id AMCG00020970
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 39047704 ~ 39104867 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020970
ATGCCACCAACAAAGTGGGCCAAGTATGGCAAAAAGTACAACGAAGACTGGGAACAGGAACAAGAACTTAAAGACTGGATAGGTCAAGTGGTCGGTGATCTTGGGGCCCTGGATGCACATTATCAGGGAATCCACTTCGAGGAGTGGAAAACAAAGGATGACTGTCAAGCAGAACAGTTCTGGGTAGAAGTTCTGAACTTCGAGGACAGCAGTGGGGAGCTGTGGTTTAAAGATCTGGCCCTGTCTCTTCTTGCAATGCCCCTTAGCAATGCCAACGTTGAAAGGCGGTTTCACAAAGTCACGTTCAAACTTGCGGCGATCTTTCTTGATCTCAAGCAGACGAATATCTGCAGCTTCTATGATGGCCTGACAATTTCAAATACCTCGCTGGCCAAGTGCAGAACACAGAAACTGGTAGCAGCAGAAGCCATCCAGAGCCCGAACTCCAAAGCATCCTtagaaggaggagagagagtgcagaTCAGTACATTTCAGATGCCTCTTGTGAGGAGGAGATGTTGGAGGGGACCAGTCAGCACACACTGGAATTGCCAGCAGAGGGGATCTCTATCAAGAGGAGTCCTGGGAAAGGAAACCTCAACCTTCTATGCCAGCAGCCAGATACGGAACAGGAACAGACAGGCAGGGTACCTGTGGCTGTCTCTGGTGCTGGGCTTCGGAGCCACACTCATCTCGCAGCACAGATCTCTACCCTCCATCATCAGGAGCCTCCCGGTCTCCGTGCCAACGATGACTTGCTTGTCTGACAGCCAGGCGTGGAACAGGACGTTGTGGGCTCCCTCTGCGTAG
>TU83728
NNNAGAGTGGTGTTTCATTGAGACATGTCGTGCAGAAGGACAATTTCAAATACCTCGCTGGCCAAGTGCAGAACACAGAAACTGGTAGCAGCAGAAGCCATCCAGAGCCCGAACTCCAAAGCATCCTtagaaggaggagagagagtgcagaTCAGTACATTTCAGATGCCTCTTGTGAGGAGGAGATGTTGGAGGGGACCAGTCAGCACACACTGGAATTGCCAGCAGAGGGGATCTCTATCAAGAGGAGTCCTGGGAAAGGAAACCTCAACCTTCTATGCCAGCAGCCAGATACGGAACAGGAACAGACAGGCAGGTAAGAGTGTTgcagtttcttgttttaattgggGGGGGCTTTAGTATTTGAGCCTGGGACAAGATTGGcaagtacagtactgtgcaaaatttTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020970 True 810 mRNA 0.52 6 39047704 39080843
TU83728 False 411 TUCP 0.48 3 39050216 39104867

Neighbor

gene id symbol gene type direction distance location
AMCG00020971 NA coding downstream 37910 39005430 ~ 39009794 (-)
AMCG00020960 NA coding downstream 589066 38427880 ~ 38458638 (-)
AMCG00020961 NA coding downstream 636842 38366127 ~ 38410862 (-)
AMCG00020959 NA coding downstream 747285 38278635 ~ 38300419 (-)
AMCG00020957 NA coding downstream 787703 38241746 ~ 38260001 (-)
AMCG00020975 NA coding upstream 12568 39117435 ~ 39529985 (-)
AMCG00020977 NA coding upstream 541882 39646749 ~ 39666597 (-)
AMCG00020979 NA coding upstream 572050 39676917 ~ 39677327 (-)
AMCG00020980 gfra2,gfra2b,LOC105911104 coding upstream 630567 39735434 ~ 39738340 (-)
AMCG00020986 NA coding upstream 1066563 40171430 ~ 40192036 (-)
G66994 NA non-coding downstream 9059 39037160 ~ 39038645 (-)
G66927 NA non-coding downstream 274896 38724291 ~ 38772808 (-)
G66926 NA non-coding downstream 315464 38707272 ~ 38732240 (-)
G66920 NA non-coding downstream 350217 38694992 ~ 38697487 (-)
G66872 NA non-coding downstream 769165 38277994 ~ 38278539 (-)
G67025 NA non-coding upstream 194019 39298886 ~ 39299232 (-)
G67032 NA non-coding upstream 390968 39495835 ~ 39527599 (-)
G67056 LOC103376870 non-coding upstream 720003 39824870 ~ 39929271 (-)
G67058 NA non-coding upstream 790552 39895419 ~ 40005458 (-)
G67080 NA non-coding upstream 1102312 40207179 ~ 40207437 (-)
AMCG00020943 NA other downstream 1415128 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 1979899 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 2001765 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 2765175 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 3060992 35975764 ~ 35986712 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 1452263 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 2491213 41596080 ~ 41602270 (-)

Expression


Co-expression Network