AMCG00020971


Basic Information

Item Value
gene id AMCG00020971
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 39005430 ~ 39009794 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020971
ATGGAATCTGTtcctattaaaaatgaattatccGAACTGGAGATTATCCATGTCAAACAGGAGATGCCTGAATTGGAGACCTATATCATCAAACAAGAGGATCCAGACATGGATTTAAAACAAGAGGTTGACTGTGTTAAGCAGGAGAAACACAAGCAGGAAATGGATGCCGTTTCCAAAGACCAGTCACTGAAATCTGAGGATGTGGACAACAGCCAGCAAATGGTCAAGAAGATGACGCACATGGATGCCCAGTATGCCAGGCCTTCGCAATATTTTGACATCAAACAAGAGGATTTggatttaaactatttaaatccTCCAGGAAAAATACTCCACAAACTGTGTACTGATGCCCAAAAAGTAACACCAAGCATGCATACAAATTGTGTAATTCCCACAAAGGCCTTTGAAATCCAGCTTCAGTTGCAGCCGAGGCAGCGGGTACCCTTACCCTTGGTGTTAACTGGGAATGAGCTCTCTGTATCTGATATCCACTCCATCTCCACCATGAGGCCAGGAGAACACACATGCAGTGAATGTGGGGAGAAGTTTGATGTCCTGGGCATGCTCAGGCGGCACCAGAAGATCCACACGGGAATAAAACCTCACCGGTGCCCCGATTGTGGGAAGGGGTTTTCGTATGCAAGGAGTGTCAAGGCCCACCAGCAGATCCACACGGGACTAAAGCCATTCGAGTGCCGTGATTGTGGCCGGTTTTTCAGACTAATGCATCACCTCAAAAGACACCAGAAAACCCACCAGAAATCCCATCCCTTCGCACTATATGGAAAGAACTTAACTTACCAGGAGAACCTCACTTACCACTCTGAAACTGGAAAACCCAAAGAGAAACACCGGTGCAATGTGTGTGGGGATGTTTTCATTCGCTCCAATCACCTGCAGACACATTTGCGCATCCACACAGCAGAGAACTCCTATAAGTGTCGGGAGTGCGGGAAAAAGTtaatttaa

Function

GO:

id name namespace
GO:0007218 neuropeptide signaling pathway biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020971 True 975 mRNA 0.46 2 39005430 39009794

Neighbor

gene id symbol gene type direction distance location
AMCG00020960 NA coding downstream 546792 38427880 ~ 38458638 (-)
AMCG00020961 NA coding downstream 594568 38366127 ~ 38410862 (-)
AMCG00020959 NA coding downstream 705011 38278635 ~ 38300419 (-)
AMCG00020957 NA coding downstream 745429 38241746 ~ 38260001 (-)
AMCG00020958 NA coding downstream 766436 38232666 ~ 38238994 (-)
AMCG00020974 NA coding upstream 84703 39094497 ~ 39096651 (-)
AMCG00020975 NA coding upstream 107641 39117435 ~ 39529985 (-)
AMCG00020977 NA coding upstream 636955 39646749 ~ 39666597 (-)
AMCG00020979 NA coding upstream 667123 39676917 ~ 39677327 (-)
AMCG00020980 gfra2,gfra2b,LOC105911104 coding upstream 725640 39735434 ~ 39738340 (-)
G66927 NA non-coding downstream 232622 38724291 ~ 38772808 (-)
G66926 NA non-coding downstream 273190 38707272 ~ 38732240 (-)
G66920 NA non-coding downstream 307943 38694992 ~ 38697487 (-)
G66872 NA non-coding downstream 726891 38277994 ~ 38278539 (-)
G66851 NA non-coding downstream 824156 38181037 ~ 38181274 (-)
G66994 NA non-coding upstream 27366 39037160 ~ 39038645 (-)
G67010 NA non-coding upstream 65916 39075710 ~ 39092196 (-)
G67025 NA non-coding upstream 289092 39298886 ~ 39299232 (-)
G67032 NA non-coding upstream 486041 39495835 ~ 39527599 (-)
G67056 LOC103376870 non-coding upstream 815076 39824870 ~ 39929271 (-)
AMCG00020943 NA other downstream 1372854 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 1937625 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 1959491 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 2722901 36260993 ~ 36282529 (-)
AMCG00020900 NA other downstream 3018718 35975764 ~ 35986712 (-)
AMCG00020970 NA other upstream 37910 39047704 ~ 39104867 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 1547336 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 2586286 41596080 ~ 41602270 (-)

Expression


Co-expression Network