AMCG00020973


Basic Information

Item Value
gene id AMCG00020973
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 39047260 ~ 39061811 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020973
ATGGCCATCAGCCCCAACCGACACTACCTGGCCGTGTTTGAGATGGGGGACAAGAGCACCATCACCGTGTATGACCTAAAACACGAGCAGCACCAGAAGAGGAAAGTCCTGAGTGCCGGGGACTTCCCAATGCAGGAGTTCGTCTCCCTGGCCTTCTCCCCAGACTCCAAGTACCTTATCGGCCAGTCGGGGGCCCCAGACTGCACCCTCTACTATGTGGGAGAAGCACAAGGTGTTGGCCTCGGTGAAGACCAGCATCACGACCAGTCTCTCAGCTTTAACCCTCAGGACAACACGCAGATCTGTGTCAGTGGCAGGGGGGTGTTCAAGCTGTTCCACTACGCAGAGGGAGCCCACAACGTCCTGTTCCACGCCTGGCTGTCAGACAAGCAAGTCATCGTTGGCACGGAGACCGGGAGGCTCCTGATGATGGAGGGTAGAGATCTGTGCTGCGAGATGAGTGTGGCTCCGAAGCCCAGCACCAGAGACAGCCACAGTCGCTTCAATGCTGCTAAGAAGGCGGAGAATGAGATGTTCGAGAGGTTTTTGAGCCGCCTTGATCCGAAGGACCTGGAGCCACTGGCCCCCACAAAGCCCTCTCTTGGTGTGTCCCAGACAGAAGTGTCTCAGCCCCCGAAGAGGCTGACTATGGACCAGAAATGTTACATAGCTCAGCTGGAGCTGGCGGAGATGGAGAAGGACATGCAGAGGTCTCGTGAGGAGTCAGAGGCAGAAATTGACCACTACAAGGCCATCATAGAAGCTGCAGATATTCGTCTGCTTGAGATCAAGAAAGATCGCCGCAAGTTTGAACGTGACTTTGTGAAACCGCTGCAGGAAAAGAAAGGAGACATGATGGTAGCGCAAAAGGTCACACATTACTTTCAGGACCGAACTCGGGCCAAGGAGACCCTTGTAGAGAGTCTGCGATTGAAAAATGCAGCCCTGAGAGAGCAGCTCAAGAAGCTCGAAATGCAGCTAAAAGAGAAACAGCTACAGAACGCTATGTGTGAATCAGACCGACTTGACAGAGAGATCTCTGCACAGAATGAAATGCTGGTGAAGCTAGACAGTGAATGCCTGCAGGCAGAAAAGGAGCGAGCCGAGGCGGAGGCTGAGAACCAGAGACTGCACAGTCAGCTCTCCGAGTACCAAGTGCCAGATACCATCCATGAGAGACATCACAACATCATGGGGCTGGCCAAATTCACTCCTCTCGGTATCATTTGCAGCTCCTGTGTGCACTTTCAATGTGTAGACATACCCGTTACTACTGTCCGCAAGCACCCACATCTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020973 True 1299 mRNA 0.54 9 39047260 39061811

Neighbor

gene id symbol gene type direction distance location
AMCG00020972 atp6v1b2,LOC108277294,LOC106563054,LOC103034689,LOC105890663 coding upstream 19733 39012711 ~ 39027527 (+)
AMCG00020969 bmp1,LOC103470513,LOC103145852 coding upstream 42431 38984877 ~ 39004829 (+)
AMCG00020968 LOC106579847,LOC108236587,LOC105014870 coding upstream 74976 38953485 ~ 38972284 (+)
AMCG00020966 NA coding upstream 145655 38898945 ~ 38901605 (+)
AMCG00020967 LOC108444561,LOC104924995,LOC105889889 coding upstream 162153 38880596 ~ 38885107 (+)
AMCG00020978 NA coding downstream 553643 39615454 ~ 39617163 (+)
AMCG00020976 NA coding downstream 555497 39617308 ~ 39686318 (+)
AMCG00020981 NA coding downstream 739468 39801279 ~ 40063685 (+)
AMCG00020983 NA coding downstream 1149331 40211142 ~ 40229767 (+)
AMCG00020982 xpo7,LOC107586117,LOC107678024 coding downstream 1168131 40229942 ~ 40269290 (+)
G66970 NA non-coding upstream 36411 39010579 ~ 39010849 (+)
G66887 NA non-coding upstream 622008 38424712 ~ 38425252 (+)
G66865 NA non-coding upstream 770966 38275990 ~ 38276294 (+)
G66861 NA non-coding upstream 802785 38240690 ~ 38244475 (+)
G66826 NA non-coding upstream 981595 37974803 ~ 38065665 (+)
G67027 NA non-coding downstream 243486 39305297 ~ 39305587 (+)
G67048 NA non-coding downstream 687346 39749157 ~ 39749361 (+)
G67180 NA non-coding downstream 1508516 40570327 ~ 40571722 (+)
G67182 NA non-coding downstream 1511743 40573554 ~ 40574856 (+)
G67207 NA non-coding downstream 1723950 40785761 ~ 40791471 (+)
AMCG00020954 NA other upstream 910187 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 1471404 37567036 ~ 37575856 (+)
G66551 NA other upstream 2129824 36914815 ~ 36917436 (+)
G66506 NA other upstream 2790749 36254699 ~ 36256511 (+)
G66362 NA other upstream 3138858 35867393 ~ 35908402 (+)
G67108 LOC100846954 other downstream 1259302 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 1494155 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 1989661 41051472 ~ 41062527 (+)
G67323 NA other downstream 2536412 41598223 ~ 41602113 (+)
G67459 NA other downstream 2991119 42052930 ~ 42053675 (+)

Expression


Co-expression Network