AMCG00020975


Basic Information

Item Value
gene id AMCG00020975
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 39117435 ~ 39529985 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020975
ATGGGCATTAAAATGGATTATACAAGACAGTCATGGAAGATTGGGCTGttggaAGATATGAACCTAGTGGAGGAAAAGGTGAAGGACCATAGgtGCAGCAGCATTACCTGTCACCGCCAGAAGGGAGAAGACAGTCTCTATGTATACCAAACCCACCCTGGAGAATATCTAGCCGAGTATATATCCTACCAGATCCCTTATGGTAGACGTGACTGGTCCCTGGTTACATTTATTACTTCTGTTCTTTTGTTGAATGACCTGACCTGGGTTGCGTCCGTCGCCGAATCAGAGGTCGACGCCCCAGCGGTCGCTGCCTTCGCCTCCGCCGCCCAGCCCCAGTGCCCAGCGGTCGCCGCCTTCACCGCCGCTGCCGCCCAGCCCAAGCAGTTGCCAGCTCCGCCCTCGACGGCCCTGGCGCCTGTGTCTACGGCTTCCATGCCTCCTGCTGCTTCCTCGGCACTACCTCCTGATGCTTCACCTCCCGAAACTACTACAGCTCCCAAGGCTTCATCTTCTACGGCTCCCAAGGCTTCCATGCCTCCTGATGCTTCCACGGCTCTGCATCCTGATGCTTTCACAGCACCGCCTCCTGAGGCTATTACTTCTCCGCCTCCTGTGGTTCCCTCGGCTCCGCCCCCAGAGGAATTTATGACTCTGCCTTCTATGGCTTCCACGGCTTCGCCCGTCAAGACTCCCCTGGCTTCCACGGCACTGCCTTCTGTGGCTTTCACAGTTCCTGCAATTGTGCTGTCCACGGTTCCTGCAATTCTGCCTCCTGAGGTCCCTTCGGTTCCACCTTCCCAGGCTCTGCCCCCAGAGACATTTACAACCCCATCTTCTATGGCTCCGCCTACTGAGGATTTCATACCTCCCGAGGGCTCTGAACACCTGAGCTGCTGGTTCCGCCTGGAGTTCCACCCACCCAGCGTGCTCAGAAGTCTAAGACACTGCAATTTCTCAAACCAGCAGATGTTGCGGGATGACTTTCCGAAGCTCTCCACTTGTGCCCGCGAAGACCCCATTCTAAATACTTCATTTCAGCCGGCTAAGGAACATGTGCAGCAGTGCCCTGAAATAATGCAACATTTCAGGCCCTCTGAAAGATCTGGGCTCCAGCCTCCTGTGTTTGATTGGCCATTTGGAAAGCAGAGTGTTATGCCCCTCATGTCATCTTCCAGAAGCTTCCTCGAGGAGATGCTGATTCTGCAGCTCAGgtTCACCATTGAGAGTGGAGTGGATTTCCTTTCAGGGCTATGAAGGGGCTGTATGCTGTTACTGCTCGAAGGCCTTCGATTCCCGTTAAAGCTGAACACACATCCCCTTTAAATCCGCCATCGCCTGTGCCAGGAGAACCATGGGCAGCGTGAGCAGCTTGATATCGGGTCACAGCCTCCATAGCAAACACTGCCGGGCCACGGAGTACAAACTGAAGAAGGCCGCTCAGTCTAAGAAGGCGAGCCGCAGTGCCGACGGGCTGCTGAGGTATGGTTTCTCGCAGGACTCGGCCAACACCACCAAAACAATCTCCCACGCAGGCAAAAGCGAGGACTTCTTTTACATCAAGGTGAGCCACAAACCCAGAGGAGGCCACAAAAGCCTGAACAAGACGGCTGGCCCAGAGGACAACCAGAGGGGACCGACTAGCAACATGGAAGCGGGGAGCATCACGCCACCCAAACTGGTGCCCTTCTCCGGGAAACTCGAAAAGgGCATCGAAAAGGGCTTGATAAGACCAACAGCATTCAAACCCGTGATTCCCAGGAGTTGCAATTCCACTGAAAGCCATAACAACTTGAACCAGATCATCAACAAAAGACTCAGCCCCTCAGAGAAGACACAGGAACAGAAGCAAGACAATAACTCGGGGACCTTATCAGATTCGGGCCGCAACTCCATGTCGAGCCTTCCCACGCACAGCACCAGTGGCAGCTGTCAAATGGACAACCTGGGCACTTCTGTGGGGCTTCAGGGCCGAGGTGGTGGAGGCTCGGCCCAGGACGGAAACCCATCACAGAATGGGGCTGCCAATGGGACCACCCATGGGAACGCTGCCCTAGGCTTCAAAGCTGTGCCCTTCTTGGACAATGGGCTTCCCCTGCAAGGCCCCTCTCCTGAACAGACTGGCGCGATTCCTTTTTCTGAGACTGCCACTTGCGTGCGTTCACCCATCTCCACGGACGAGATCCTCATTCAGCAGCTAGAGCAGAGGCTGCTGGAGCGAGAGTCGGAGCTACAGGAGCTGCAGGTCAGCTTTGAGGAGAAGGAGTCCGACACCTGCCAGCTCTTCGAGGAGAAGCAGAAGTACTGCAAGGAGGAGATGGAAGGGCTCAAGCAAAGGTGCTCCACAAAGCTGCGGCAGGTCTCCCAGAAGGCGCTGAGGGCTCAGCAGGTCCTGCAGCTCCAGGTCTTTCAGCTCCAGCAGGAGAGGAAGAAGCTGCAGGAGGATACCAGCCAGCTCTCACAGGAGAAGGACCTGCTGGAGATGAAGCTCAGTTCCTACAAAAAGGAGCAGACCCAGCTGGCACCTACTCTAGAGGAAACTCAATGGGAAGTATGCCAAAAATCAGGCGAGATCTCACTGTTGAAGCAGCAACTAAAGGAATCTCAGGGAGACGTGAGTCATAAACTCAACGAAATAGTCAGTCTCAAATCTACACTGAAGGAGATAAGGGGCAAGATGGAAGCCCTTGAGCAGAAGATCAAGTTGCTGGAGGAGACTGTCTGCACCCGAGCTGTTGAGGTGGAGGTCTGCGAGAACGAGCTGCAGAGGAAGAAGAATGAGGCGGACCTGCTGCGGGAGAAGGTGGGCCAGCTGGAGACTGACATCAGGAACATGAAACAGGACCTGGCCCTGGCCaaggagcagcagcagagcagcaggGCTGAAGTAGACAGGCAGAGAGCGGTGGGCCAGGGAGAGGGCCCAGAGGACTCGGAGGCTCTCCAAAGGGAGGTGGAGAAACTGAAAGCCGAGCTGAGGGAGGAGAGGCAGAGGAAGGAGAAGATGGTGAGCAGCTTCCAGATCGAGAGACTCACATGGaacagggagaaggagaaggtgaTCAAGTACCAGAAGCAACTGCAGCAAAACTACTTGCAGATGTACAAGAAAAACCAGGACTTAGAAAAAATCCTCAAGGAGCTCACTGTGGAGCTGGAGAGCCGGACAGAGCTAGACATGGACATCCAAAGCGCCGATATTCACTATGAGGACATCATCGCCACGGAGATATGAGGGCCAGCAGCATCGCAATAGGAGGCAGGAGACGAGAAAAAAATGAGAAGGTGCACACATGCTTCCTGGACAGGTCTGTTTTTCATAGGCTCTTCATGCAGGTGGTTCTCTTGGCTTGGTCGGTCAGGTTTGCGCTTTGTTACTTCATTTGCCGCCCGTTGTATTTTGCAATATACTTGCTGTATTTTATCACACACTATGAGATATATTTTTGATTCACAAATGGATAGCTaactctgttaaaaaaaaagaaaggattcAAAAGATCAAGACCAAAATATTGTACAGGACTACGCAGTACTGTgtttatacaaaaaacaaacacaaaaaaagccaTCTACATGTCCTGTAATAGCCAGAATCCAAGTGTACCAGATTGGTCTCAGAAGGACATTGTGAGTCTGTCCTGCATTGTGCACCACAAATACACATCGCACAGTTCTGAGTAATCACCAACATTAAGTGGGGTCTGAGTCACAGCCTGATGATGTATTGAGACTACAATACTGCATGACACAGAATTTGCACAACTATGGTGCTTATATGAAAAATGGTAAATGTCAAGGTGGTATACAGCCAAAAGATATGATTGACATAAACATGCAGTGCAGAGTGAACCTCAACCTCCACTGAAAGCAGTTCATCCACTTGCGTAAACTGCTGGTGAGTGCAATGTAGCCAAACATAGCTGTAGATAAGATTGCACATTGGCCGCCTGTGCTGCACCCGCTCTGTGGGTGGAGCACTGCAGTGCTCGAAACGCAGAGCAGGTGCTGCACAGGCGGCCAATGAGCAATCTTATCTACACTGCCATGTCAACAACCCTCAACCACCCTGTTCTGGAGAGTATCGCTTAGCAGTGGAAAAGGCGGCTCAGTGTCAGAGTACAATGGAAAGTCAAATGCTagcactgatttttttttttaaaacagcaataCAGATACTAATGACATTCATCCATACATACGTTCAATTATACTCTGCCTTGTTCAGGTTTCATTGTAGTAGTTCCCTTTCCTAGTGGAGTACCTCCTTCATTTGGTATCATTACCAAATCCTTTCCATCTTTTTTGTAGgcaatatacaaatattgttcCCAAAGCACAACTGTGAGGTATACAGGAAGCCAATCCTTCTGTTTGatatataaaatagaaaaataccaATGAACTTCATGCTGTACTGCCAACAAGCTACAACCTAAAATACCATGTTTTATACCATATATAAATACCATAGTGCTCTCTCTTATTTTGTATGTGCTCTCATATCAATGAGCTCTAATTCATTGTTTATCATTAAATGTCTGGAATATGTAAGGAAGAGACACCAAATTACacttaaaaaactaaagaaatgttgtgcttttgtaattttattttaatctaagaATCAAATAGATTTTATTACATTAGGAACACAAATCATAAGAACACAATGGGAAACCAAGCTGGTTCATTGACAGATCAAGAGTTGTAACAGCCGTTTACCACATTATAGTACttggatgttgttgttttttctgatttctatttttattttaaaataggtaTATCTGGTAGGCAATATAATGGTGTGAAATGTGCCTTGTTAAAAGTAAAGGAATATTTGCATTCAACAGCACAGGCTTTACCAAGACATTGCAATTGTTTGAGAAATGTATTGCTTGTAACTCCACCAGAAATAGTCAAGCACACATAATAGCTGGGTTATTTTTGTAGTCAGCAGAAATTCAAATAGAATATATGTctaaaactgcaaaatatggCAAATGATAAGAGGTTCCATGCAGATaaccaagaaagaaagaaaaaccctGACAGAagcatatgtattttaatggattttaagTGGATTTTTCTCTGAAAGGACCACACAAAGGTTTTGAGTGTGCTTGTTCAGCCACAGCTGTAAGATACCATCAGGTTATCTAGCAAAGGTGTGTGGCAGAGGAATTTGCAACACTTCCACAAAACATTCAGGTGATTAATGAACTGTTAAAGAGCATCCTTGGACAGAGAAGGCATGAAGTAAAAATGGGGAGAGATAACAGTGCACTTATAGGTCTTGACTTCTTACTGACAGTATGAGTGCCTTCAAGAGTGTGTTGTTATTGAGTTCCCATTGAAAACCAGTTTGGAATGGCAGCGAGAACAGATAAAGGAGATCTTTAAATGCTGCTGGACAGGCTTctatcatttgttttacataggCCAAAGTGTGGAGTTATCTGCCAGTGCCATTCGGTAATGAGCCATAGCTTGCTTTGTTGGCAGCAAtcttttaaatagaaaaaaaaacatctgtaggtttgtttttctttactttagaaagcagtcaaatatatatattttaggcaCACTAACAAATCAgagcaaacagaaacaaagaattCACAGAGACACTCTGGGATGGTTATAGTTACACATACTTTTGGAAAGTCTTCTAAAAACCTGTAAAACATAATTGGCTTGCATTGAAACTACAGTTTtgccatttgtttaatttgcaagaTAGTAATGTAGAGTGGCTGTCTAACAATTTGCTACCACATGCTCAATTGATATTGCCAGTGCAATAGAAGTATGTTAActcaaagggaaaacaaatgattTATGGAGAATGATTTACAGGGTATGATTTATAGCTGTCCATTTTGAAACTGAACTGAGGTCCACCTTTAATCTCTTATCCTGTAAGCACACTACTTCTTACAGTTTCTGATGGGTTTAAATTTTGAGCCTCAGAGTACAAACGATAGAGAAACAATTCATTatcttaattaataaataaataaataaataaaataaaaggaaaaagcatCCCATATTCTACCATCAATAAacagttgaaaaataaatattagtataaAGTCAACTGTAgacattcttcattttttttaaactaaagctTGGTGAAGATGGTCTTAGCCAATcgcattttctgaaataaagtCTGGACAAAATAATCCATTCTTTATTATCAGAGCAGCTACTGAGACCAATATGCAATGTTTTCTTGTGCACTGGATTTCTAATGGGCTAAAcctgattattttgttttattgaaacctcttgttatttttactggtgcatttagatttaattagGTTAGCAAAGCAATTGAATGAAGCCAGCTCGAGATCTATATAAGCCAAGACCAAATGTTATCAGTTTGAGACTGGAATTTGACAGGGCATGAAAAGATATGATTACAAAATTGGGCTTActtccatgtttttttaatcattatttacaCAGTTAGAAGTCAAAAACGTGGCCTTGAAACCAGATATCTTGATTCAGCACAAATTAGTTCCAGCTGTCAAAAACTGTATCACTATGATTaaagtaagaaaaatatttcagGCAGCCAATTCAAAGAACCAATTTTTGAAACCAAGTTATACCTGAATAATTCCCTTAAAATCATTACCTACTTATTAAATAGGTAAACAACTTGTGTTACAAAAGTATAGGATTTCCTCATGAATATTAAACATGTCCATAATGGTACTATTACAAgcacagaatattttaaaaaggatttgCATTTCCCTCCCAATGTTAGCCTGTGTTCTGTTAGCATATGGCTTCTAATCTTATATTCATAAAGGGAAATGAGATTCAACAGGGGAAGAAATAACAGCTTCTGtgctttttcaacttttttcaTGCTAAAACAATGCACTTGAATTGTTTTCTCATTCAGCtgcacactgtactgtgttCCTTATATTGCATCTACCATTTCACATACCATTATCCATTTCTGTAGAAAGCAGGTGGTTATTTATTGTTGACGCTCAAAGACCACagagaataaatgtatatatatattttttaattggccTATGTAGTTTTCATcatctg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020975 True 7107 mRNA 0.44 14 39117435 39529985

Neighbor

gene id symbol gene type direction distance location
AMCG00020974 NA coding downstream 20784 39094497 ~ 39096651 (-)
AMCG00020971 NA coding downstream 107641 39005430 ~ 39009794 (-)
AMCG00020960 NA coding downstream 658797 38427880 ~ 38458638 (-)
AMCG00020961 NA coding downstream 706573 38366127 ~ 38410862 (-)
AMCG00020959 NA coding downstream 817016 38278635 ~ 38300419 (-)
AMCG00020977 NA coding upstream 116764 39646749 ~ 39666597 (-)
AMCG00020979 NA coding upstream 146932 39676917 ~ 39677327 (-)
AMCG00020980 gfra2,gfra2b,LOC105911104 coding upstream 205449 39735434 ~ 39738340 (-)
AMCG00020986 NA coding upstream 641445 40171430 ~ 40192036 (-)
AMCG00020985 NA coding upstream 681558 40211543 ~ 40227671 (-)
G67010 NA non-coding downstream 25239 39075710 ~ 39092196 (-)
G66994 NA non-coding downstream 78790 39037160 ~ 39038645 (-)
G66927 NA non-coding downstream 344627 38724291 ~ 38772808 (-)
G66926 NA non-coding downstream 385195 38707272 ~ 38732240 (-)
G66920 NA non-coding downstream 419948 38694992 ~ 38697487 (-)
G67056 LOC103376870 non-coding upstream 294885 39824870 ~ 39929271 (-)
G67058 NA non-coding upstream 365434 39895419 ~ 40005458 (-)
G67080 NA non-coding upstream 677194 40207179 ~ 40207437 (-)
G67103 NA non-coding upstream 761533 40291518 ~ 40291726 (-)
G67181 NA non-coding upstream 1040342 40570327 ~ 40571996 (-)
AMCG00020970 NA other downstream 12568 39047704 ~ 39104867 (-)
AMCG00020943 NA other downstream 1484859 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 2049630 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 2071496 37020011 ~ 37045939 (-)
AMCG00020911 NA other downstream 2834906 36260993 ~ 36282529 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other upstream 1027145 40557130 ~ 40640339 (-)
AMCG00021012 NA other upstream 2066095 41596080 ~ 41602270 (-)

Expression


Co-expression Network