AMCG00020978


Basic Information

Item Value
gene id AMCG00020978
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 39615454 ~ 39617163 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020978
ATGGTGGAGGACATCGTGATGCCAAACATGGAGGATAATGAGGACAAGGAGGACgatgaagaagaggaagagggggcAATAAGACTCGGAGAGAGCGATAAAGAgagtgggggcggggggggaccTGAGGGACCGAGGCGTCCTCAGTTAAAGTCTTACCCGACTCGAAAATTTGGATCTCAATCAAGGGGGTTTAACAACTCTTGGTTCAAACAATACTCGTGGCTGGAATACTCGCTCTCAGTTGATGCTGCTTTCTGCTATGCATGTACACATTTTATCTACCATGGACTGGGTCATATTGAAAAGAGCTTCACCCATGCTGGGTTTCAAAACTGGAGAAAAGGAGCAGAGAAACTGGCCCAACACAATGCAAGTGTTTCCCATAAACTAGCCATTGAAGCATGGTGTGAATTTAAGAAGATTTTAACACATCTTGACATTGGACATTCCAAGATTGTACAAGAAAACAGGCAGTACATGCGAGCTGTAGTTGAGTCACTACGGTTTACAGCTTGTCAAATGATTGGTCAGCAAGGGCACAGAGAAAACAAGCAATCCACCAGCAGAGATGTGAGCGACCAGTCAAATGCTCATAGGGCGACCAAAGCAAAATCACTGATTGGATTAATTGATGGACAGTTTGTTCTGCACGTCACTATGCTGGAAAGCATATTCAGCCTCACAAAAACCCTATCCGATCACCTACAGGCCACAGATTTGGGGCTGGCATCTGTCACTGATCTGGTCTGTTCAGTTGTCAATACCCTCAACAAGAAACGCAATGTTGAAACATGGAATGCAATCTGGGAGTGTGCTATGGGCATTGAAATGCAGCAACCACAGGTGAGGAGAAAAGCACAGCCTCGCCACCTGCAGGAGTTTGTGGTGAACAGCCAAACAGGGTCAAGAGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020978 True 918 mRNA 0.47 5 39615454 39617163

Neighbor

gene id symbol gene type direction distance location
AMCG00020973 NA coding upstream 553643 39047260 ~ 39061811 (+)
AMCG00020972 atp6v1b2,LOC108277294,LOC106563054,LOC103034689,LOC105890663 coding upstream 587927 39012711 ~ 39027527 (+)
AMCG00020969 bmp1,LOC103470513,LOC103145852 coding upstream 610625 38984877 ~ 39004829 (+)
AMCG00020968 LOC106579847,LOC108236587,LOC105014870 coding upstream 643170 38953485 ~ 38972284 (+)
AMCG00020966 NA coding upstream 713849 38898945 ~ 38901605 (+)
AMCG00020976 NA coding downstream 145 39617308 ~ 39686318 (+)
AMCG00020981 NA coding downstream 184116 39801279 ~ 40063685 (+)
AMCG00020983 NA coding downstream 593979 40211142 ~ 40229767 (+)
AMCG00020982 xpo7,LOC107586117,LOC107678024 coding downstream 612779 40229942 ~ 40269290 (+)
AMCG00020990 NA coding downstream 660159 40277322 ~ 40284496 (+)
G67027 NA non-coding upstream 309867 39305297 ~ 39305587 (+)
G66995 NA non-coding upstream 565823 39049421 ~ 39049631 (+)
G66970 NA non-coding upstream 604605 39010579 ~ 39010849 (+)
G66887 NA non-coding upstream 1190202 38424712 ~ 38425252 (+)
G66865 NA non-coding upstream 1339160 38275990 ~ 38276294 (+)
G67048 NA non-coding downstream 131994 39749157 ~ 39749361 (+)
G67180 NA non-coding downstream 953164 40570327 ~ 40571722 (+)
G67182 NA non-coding downstream 956391 40573554 ~ 40574856 (+)
G67207 NA non-coding downstream 1168598 40785761 ~ 40791471 (+)
G67221 ppp3ccb,LOC107678020,LOC107553709,LOC107720725,LOC107586120,LOC107705087,LOC103046193 non-coding downstream 1332936 40950099 ~ 40965912 (+)
AMCG00020954 NA other upstream 1478381 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 2039598 37567036 ~ 37575856 (+)
G66551 NA other upstream 2698018 36914815 ~ 36917436 (+)
G66506 NA other upstream 3358943 36254699 ~ 36256511 (+)
G66362 NA other upstream 3707052 35867393 ~ 35908402 (+)
G67108 LOC100846954 other downstream 703950 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 938803 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 1434309 41051472 ~ 41062527 (+)
G67323 NA other downstream 1981060 41598223 ~ 41602113 (+)
G67459 NA other downstream 2435767 42052930 ~ 42053675 (+)

Expression


Co-expression Network