AMCG00020981


Basic Information

Item Value
gene id AMCG00020981
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 39801279 ~ 40063685 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020981
ATGCACCCACAATCAATCCAGAAAAGAACGGCCACCCCAGACACCAGTAGCCCCCTCTATTCTTCCGCCACGACCCAGTTCTCCATCATCCCGGGAGATCTGGGACTGataaCTTTGGATCTTGATAACTCTTTTGGTGGAAGTCAGGTGCCAGATTGGctcatTTGGTATGGTCTTCTCATTAGACTTGTCAATCATGTCTGCTTAAAAGAGACACCAGTTGATTTGACCACAGAGGAAGAATCTACCATTTATGACAGATGTGCGAAACAACTTTACAACTACAACCATCCAGAGAAGAAGGGATGGGGGCGGACGTGTTTGAACAACGCCGTGAAGCCCCAAGTAACACAACTTCTGCGGGTTCTGGGCATCTCACCCATCCTGTGCTCTCTCGGGGGGCGCTCCCCACATGAGCGTAGGCACCACTACTCCCACTCCAGCAATCACAGCCCTGGCTACTCATGCTTGTTGCCCAAGTGTAGGGCTCTTAGGGGGGCCCCCGACATTTTAGTGGTGAAGACACAACACATGTTGTCCATCCTGACCTGGATCCTGTTCTTCCCCCCTCCTTGCACTTCTGGTGCCACCACCACTGGTTACAATGCCTGTGATTATGGCACCATCTCCTCACCCTGTGGAGCCTCGCTTTGCAGAGCAGTCCTGCTTGTCGAGACGGGGTGCCTGGAAGCACTGGGTCCCCTCAATGGCATCCTGATGTGGAGTACTCGACTTACTCTTGGGGTGTCTAGGAAACTGCAAGTGGTGACTGAAGAAGAAGATGCTGTGAAGTTGgccattaaaaagaagaaggatAAAGAATCACACACCACTGCtaagtttTCTCTCCACACCAATCAGGTGAACTTAAATAACATTCTGGCAGTGGTAACTGACAATGCATCATATTGTCTTAAAGCCTACAAACATGTATTGAAGGGTCTAATGCCTAACAGTGTGCATGCAACCTGCTTGTGCCATGTCATCAATTTGGTGGGAGAGACCTGGCAACACTACAAATACTTCAGCAAGGTCACAGCTTTAGTGATGTGGGTGAAATCTGCTTTCTTCAAAAAACCTGAAAGAAAGAGGAGATGGCTGTGCTTTTTGACAATGAAGGAGACTGAAGCCCAAGATGACAAGCTAGAGGCCCTGCAGGTGAAGCTGACCTTCATCTCTGAGGGGTGTGGCAAACTAGTTACAGCTCTGAGGGTGCTTGAGGGCACCCACTCTCCCACAGCATTCTCTGCTTATAACATCATGGAGGATCTTGGTGCCTACTTAGTTAATGGAAAAGCCAAAACCCATGGCTTTGGGGTCAAAACTGATGAGCTGCTGAACCAAATGACCATGCAACAGAAGAGGGATGTACTTGATTACCTTCATGATGGATTTcacattgcatttgaaaaaaaatcaaagcactGGGATGTCCATCCTGCCAGAGAGATCTACAAGATGATCAGAGTGTTTGATCCCAGACAGGCACCTGCGATGGAAAGGTATGTTGAGGCCTATGGTACACTGTGGGTTCTGAAGAGCCCATCTCCAGAGCTCACCCTCTCAACTTCCCTGGACCTTGCTGACTACTGGAAAGGCACAAGCCAACAATTTCCAAGGGTTGCAGAAATTGCAATGTCCTACATGTATCTTCCAGTCAGTTCAGTTGACTGTGAAAGGAGCTTCAGCAAGTACAAGACACTCCTCACTGACAAGAGAGAGTCTCTTACTGAGCTCAACACCAAGCGCTCCAATACTCCATCATTTGAAGTTGTCGAACCTATTGTGGTctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020981 True 1794 mRNA 0.48 15 39801279 40063685

Neighbor

gene id symbol gene type direction distance location
AMCG00020976 NA coding upstream 114961 39617308 ~ 39686318 (+)
AMCG00020978 NA coding upstream 184116 39615454 ~ 39617163 (+)
AMCG00020973 NA coding upstream 739468 39047260 ~ 39061811 (+)
AMCG00020972 atp6v1b2,LOC108277294,LOC106563054,LOC103034689,LOC105890663 coding upstream 773752 39012711 ~ 39027527 (+)
AMCG00020969 bmp1,LOC103470513,LOC103145852 coding upstream 796450 38984877 ~ 39004829 (+)
AMCG00020983 NA coding downstream 147457 40211142 ~ 40229767 (+)
AMCG00020982 xpo7,LOC107586117,LOC107678024 coding downstream 166257 40229942 ~ 40269290 (+)
AMCG00020990 NA coding downstream 213637 40277322 ~ 40284496 (+)
AMCG00020988 fgf17,LOC106585328,LOC106580010 coding downstream 247835 40311520 ~ 40319723 (+)
AMCG00020989 NA coding downstream 305549 40369234 ~ 40386635 (+)
G67048 NA non-coding upstream 51918 39749157 ~ 39749361 (+)
G67027 NA non-coding upstream 495692 39305297 ~ 39305587 (+)
G66995 NA non-coding upstream 751648 39049421 ~ 39049631 (+)
G66970 NA non-coding upstream 790430 39010579 ~ 39010849 (+)
G66887 NA non-coding upstream 1376027 38424712 ~ 38425252 (+)
G67180 NA non-coding downstream 506642 40570327 ~ 40571722 (+)
G67182 NA non-coding downstream 509869 40573554 ~ 40574856 (+)
G67207 NA non-coding downstream 722076 40785761 ~ 40791471 (+)
G67221 ppp3ccb,LOC107678020,LOC107553709,LOC107720725,LOC107586120,LOC107705087,LOC103046193 non-coding downstream 886414 40950099 ~ 40965912 (+)
G67272 NA non-coding downstream 975169 41038854 ~ 41039096 (+)
AMCG00020954 NA other upstream 1664206 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 2225423 37567036 ~ 37575856 (+)
G66551 NA other upstream 2883843 36914815 ~ 36917436 (+)
G66506 NA other upstream 3544768 36254699 ~ 36256511 (+)
G66362 NA other upstream 3892877 35867393 ~ 35908402 (+)
G67108 LOC100846954 other downstream 257428 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 492281 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 987787 41051472 ~ 41062527 (+)
G67323 NA other downstream 1534538 41598223 ~ 41602113 (+)
G67459 NA other downstream 1989245 42052930 ~ 42053675 (+)

Expression


Co-expression Network