AMCG00020983


Basic Information

Item Value
gene id AMCG00020983
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 40211142 ~ 40229767 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020983
cttgacttgagacacaggagTGGAGGAGCAAGGCTGAAGCAGGTGACAGCAGGTGACAGCAGGTGACAGCAGGTGACAGCAGGTGACAGCAGGTGACAGCAAGTGACAGCAAGTGACACACTAGGTTCTACCCATGGCGGATGACCAGAGAAGTGAGACGCTGCAGTGGTAGTAAGGATTTTTGACTGGGAGAAGCTAAGTGAATTTATATTAGGAATTTATACCCTCATTGAGGTatagattgtgtttttttttttgttttgttggaagCTGTCACTGCCGTGGACctgctctcttcctctcttgAAGCCTCCTccactccctctcccactcctgTAGCAAAGGAAAAGTGACTTACTCGGTCTGAGACTAACTTGCATATGACCAGTGATATGTATGACCTAGACCTTTTTAGGGCCAGTGGAGTTGGGGATCCCTCGGAAGACTGACGACGAACCTGTGAGGAGAGAAACATGATTAAAGAGAGGCAGAAAAGGAAGTAGAATGGAGGAGAAACCAATTGGTGAGGAGCAAACGCCGACCGAAACAGGTTTGACCGTCGGAGCCGCACACTGCGTcctgggacacacacacacagcgcggCTCCGGGATCTCTCCGTGGCTCAGGTCCGACAGGTCAACTCTGCACTCCAGGTCGCGTCCACAGAGCCCGTAGAAGCTACTGACGGAGTCCAGGTCGCACAGTTGCCCTTCCACGTTGCCGCAATCGAAGCAACAACCGCAACTGTCCAGGACCAGTCCAGCGGCGCAGCCCTGCGCGTCCGAGCAGAGCTCCGGCGAACAGGGAGCGCACCGCGCTGCATCTCCGGCGTCCTTTTCGTCCTTGCTCTCGGGAATGGAGCCGTTTCCCTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020983 True 876 mRNA 0.54 3 40211142 40229767

Neighbor

gene id symbol gene type direction distance location
AMCG00020981 NA coding upstream 147457 39801279 ~ 40063685 (+)
AMCG00020976 NA coding upstream 524824 39617308 ~ 39686318 (+)
AMCG00020978 NA coding upstream 593979 39615454 ~ 39617163 (+)
AMCG00020973 NA coding upstream 1149331 39047260 ~ 39061811 (+)
AMCG00020972 atp6v1b2,LOC108277294,LOC106563054,LOC103034689,LOC105890663 coding upstream 1183615 39012711 ~ 39027527 (+)
AMCG00020982 xpo7,LOC107586117,LOC107678024 coding downstream 175 40229942 ~ 40269290 (+)
AMCG00020990 NA coding downstream 47555 40277322 ~ 40284496 (+)
AMCG00020988 fgf17,LOC106585328,LOC106580010 coding downstream 81753 40311520 ~ 40319723 (+)
AMCG00020989 NA coding downstream 139467 40369234 ~ 40386635 (+)
AMCG00020987 NA coding downstream 169169 40398936 ~ 40431760 (+)
G67048 NA non-coding upstream 461781 39749157 ~ 39749361 (+)
G67027 NA non-coding upstream 905555 39305297 ~ 39305587 (+)
G66995 NA non-coding upstream 1161511 39049421 ~ 39049631 (+)
G66970 NA non-coding upstream 1200293 39010579 ~ 39010849 (+)
G66887 NA non-coding upstream 1785890 38424712 ~ 38425252 (+)
G67180 NA non-coding downstream 340560 40570327 ~ 40571722 (+)
G67182 NA non-coding downstream 343787 40573554 ~ 40574856 (+)
G67207 NA non-coding downstream 555994 40785761 ~ 40791471 (+)
G67221 ppp3ccb,LOC107678020,LOC107553709,LOC107720725,LOC107586120,LOC107705087,LOC103046193 non-coding downstream 720332 40950099 ~ 40965912 (+)
G67272 NA non-coding downstream 809087 41038854 ~ 41039096 (+)
AMCG00020954 NA other upstream 2074069 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 2635286 37567036 ~ 37575856 (+)
G66551 NA other upstream 3293706 36914815 ~ 36917436 (+)
G66506 NA other upstream 3954631 36254699 ~ 36256511 (+)
G66362 NA other upstream 4302740 35867393 ~ 35908402 (+)
G67108 LOC100846954 other downstream 91346 40321113 ~ 40321821 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 326199 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 821705 41051472 ~ 41062527 (+)
G67323 NA other downstream 1368456 41598223 ~ 41602113 (+)
G67459 NA other downstream 1823163 42052930 ~ 42053675 (+)

Expression


Co-expression Network