AMCG00020995


Basic Information

Item Value
gene id AMCG00020995
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 40490686 ~ 40530054 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00020995
CAGGTATCGTACCTCATCCATGCTGAAGGGAAGGATCATGTTGTCGTTCTGGAGAAGAATGAGCTACTCCTCCCTGAAGACTTCACAGTGTTTACGTACTCTGAGGAAGGGGCTCTGATTACCCAGAAACCAGAAAACCATTGCCATTACCAGGGTTTTGTGGAAGATATCCCAGACTCCACAGTGGCTCTCAGCATCTGCTCTGGTCTAAGaggtATTCTTCATACAGCCAATGGCAGCTATGGAATAGAGCCCGTGGAGTCTTCCACCACCTTCCAGCACCTCATCTATCGGCTGGAAAATGTCCTGTCAGAGCCTCTGGTCTGTGGAGTCCCACATGCTGAGCAGCATCCCTCAGAGACCACACACGCATGGGTCTTGGATCCATTATCTATGACACAGCTGTTGAGaAGGAAGAGGGCTGTGTTGCCCCAGACTCATTATGTAGAGCTACTGCTGGTAGTGGACAATGAGAAGTTCAACAACATGAACCGCAATCAGACTGCAGTGCGAGAGGAAATGGTTCACCTTGCCAACTACATTGACAGCATGTATGTTGCCCTAAACATCCGTATAGTCCTGGTGGGACTGGAGATCTGGAACCAAAAGAATATGATCAATATTGATGGCAGCGCTGGCGAGGTGCTGGGCCTGTTTGTTCAGTGGAGAGAGAAGGAGCTGGTGACTCGCCGGAGACACGACAGTGCTCAACTGGTCCTGAGGAAGAGTTTCGGTGGCACGGCTGGGATGGCGTTCGTCAGCACTGTCTGCTCACGGAGTCATGGAGGAGGAATCAATGCGtacacaaacaacaacatccaGGCTTTTGCTTCCATAGTCGCCCATGAACTTGGACACAATTTGGGCATGAACCACGATGATGGGCGATCCTGTCTTTGTGCCGTTTCCAGCTGTATCATGAACTCTGGTGCTAGTGGTTCCCGCAACTTCAGCAGCTGCAGCTCGGATGACTTTGAGAAGCTGATCCTGAACAATGGCGGGAACTGCTTGCTCAACATCCCACGGCCGGACGAGGCCTACAGCCCCCCCTACTGTGGGAACAAGCTGGTGGATGTGGGGGAGGAGTGTGACTGCGGCTCTGACAAGGAATGTGAGAAAGATCCTTGTTGTGAAGCGAAAACTTGCAAGCTGAAGGCCGGAGCGCAGTGCTCTGACGGAGTGTGTTGTAAGAACTGTCAGtACATACCTGGTGGTACAGTGTGCAGAGGCAGTCATGATGAATGCGATCTCCCTGAGTATTGCAAcggctcctctcctctctgtcagCCCGATGTCTTCAAGCAAAATGGTCACCCTTGCAAGACGAGCCAGGCCTACTGTTACAACGGAATGTGCCAACACTTCGATAGCCAGTGCCAAGTCATCTTTGGACAAAAAGCCAAAGCTGCTCCAGAAGTCTGTTTTAAAGATGTCAACTTGAAGGGAGACAGGTTTGGAAACTGTGGATACCAAGGTCAAGGTTACAGGAAGTGTGAGAGCAAGAATGCCATGTGTGGGAAGCTGCAGTGTGAGAATGTGCAGACAGGCACAGTGTATGGTATCCAGCCCTCCATCATCCAGACACCCATCGCTGGCACCACGTGCTGGGGGGTGGACTTCAAACTGGGCTCTGATGTGCCCGACCCTGGCATGGTGAATGAGGGAACCAAATGTGGCGAGGACAAGGTGTGTTTAAATTACATGTGTGTGAGTTCTGAAGTCCTGAACTACGACTGTGACGTAGAGAAGAAATGCCATGGCCATGGGGTGTGCAACAGTAACAAAAACTGCCACTGTGATAATAACTGGGCACCTCCTCACTGTGAGAACAAAGGCTATGGAGGAAACAAGGACACCTCGACACGAGACGGCCTTCTGGTCTTTTTCTTCTTGATCATCCCTCTCTTGCTGCTGGCAGCCTACATCTTTCTCAGGAGGAATGAACTGCGGCGTCGTTTCTGTAGGAAGAAAAGATCCCAGGGATATGACCCCTGGAAGAAGTCAGCCACCGAGAAGTACCTCCAACAACATTGTGAAAGATGGGGTTGTGCAGACTACCCGGACCGCCGCAGTCCCATCATACGCAACCAAACCACCACCACCCTCTCAGCCCAGATCCTTTGCGAAACAGCAACTTATGCCTCAAAGACCAGCCCCACCTCCTCCTGTATAGCTTATTGGGGAGGGGTGCTTGCATTGTCCAAATGAGGCTCTCTCCCCTGAACCAAAAAGAGCTTAATCCAGACAGTAACAGACAGCCACCTGATAAACGATTGCCTTTGTATTAGAGGCAGACGAGAATCTCcagcttcttttttttcaagCTTGACTACAACTATGACTTGGCAGGGTGGAAGACAATGCCATCACCAAATGAACACGCCACTCTCTGTTCTGTTACTGCTTTACATTTGCAAACCATGGGAATGTTGAAAAAGCAGCTTGCAAGTCCCTGATGTGGTGGGGGGGaacaaaatgcagatttttaaatattttttatgtttgattgttttctaagattgttttaaattcttatAGTTCTGATGTGGAATGTACTTAAATGATTGTTGGCTTATCTTTACCATTGGAGGATCCCAGCGAATGTTATCCTACCCCCCCAATCCCAAACTCAAACTTCTGAATTTTACGAAGACTTTACTGGGGCTGctactgtatttcatttttctttaatttgaatttggtTATGAGCTGTTTTCACAGCAGATCATTTATCAGCACACTTGGCAAACCACTGTCCTGCTGCATCTCTCAATGCTGCTGGCtaagtgctttttatttaattttaatatatttttatcttcaaaCCTCTGGTACAAGTTTTCCCAAAACAAGGAACAAGCCGCAAAattgtctttttatatatatatcatctgATCCAGGAGAGTGTTTTGGATATGGACACCATTTTTCTGCTTCTGAACCTCACaacactacaatatatattttttaaagtcttcaaaaacaTGCAAGTTCAGGACTATCAACTCACCATATGTGCaatatcacaaaatacattgatttaccAAGTTCCACAAACAGTTGGCTGAGGGGAAGGGGAAGTGTAAAGACGATTTAAGAGAGATTCACAGTGAGGCAAAGTACAATCTGAACTTTGACCTCTTAACTTTAAAAGCCCTTTCATACCTACTTCGTAGACAATTCACAGCTAAGACCTGTTTTCAGTTGACctgttttattcataattttgttATAAGTAAACACTGTGCCTAAAGCATTCATTAATCCCGCAAGACATCCAAAATATTTAGTCCACACCAAAAAATTGCACTAGAATTAATTCACCCACTGAAACCATGCTATTCCCTAGAGTGAGATtcaattgtaatgcatttagGCCTCAAAGTCAGTGTTTAAGCAGTCTCATTACAATTCACAATATTACAGAAACCGAACCATCTGTCTAACCTCAAATAATTGACCTGCAGTCTTTAAAGTACTCGCCAGTGTAATGTGGTCATTGTGTAAGGAGCTCGTAGCAATTATGTAATCCTTCTACATTCAGAAGAGTCTATAAATTGCCCGCGTTGGGAGACTGGTCTTTTGCCGTAGTGGGTTGGTCGCTCTGCTGGGTGGAGCACAGGGCTCAGAGGTGTGCCTATGATGGCGCGGTTCGAATCTGAGCAGAGGCTCCGACCTGTGCACGCTAACACTAGCCTGAATGAGTTtcatcaaacttaaaaaaatactttgcaaaataagtaatagacctaattaaaatgaaggatGCAAGAATATAATGAGCATTCTACTGCTGCCAATGTTTCTCAGCTCCTTTTAAATGTGCCCGgtcactgtaaataaactatatataaatagtatttataCAAATAGCTTGGTCTCACACAATTGGTATTCCTGCCTTgacaaattgtaaatgtataattacaatacagtaaGTTTGATATGAGAGGTTAATATGCAGATTGATAAGGATTGCAAATAAGTCACTGATGCTTGGCTAAGAATGCCACTGGCAATGCAAAGcagacaaaattgaaaaaatagaaacattctATTTTGTCATCTTTGGAAACTTTCTCCTTGCagcataaaaacatacaaaaactaaCATACCAACAGGTGATATCAAATAAAGCAACTGAGAGAAGATGGGATTTTTGCAAACCTGACACGTTCTGAACACTCCCTTGTTTATACTTTGACTGTTTTGAACATCCATCTTGCAATTAACAGTACATACCATTATCGTCCAGTCAATCAGATTTACTTGGGGGGaacaatgtgaaaacaaacattgcGGTTGTAAGAAATAATGGACCTCCTGTAAaagtgactggaactaagacaattcaggttaaatatgatttattacagagtTAATAATATAGACACATGACAAAACTGTGAGCTCATTTAAAGCTTGGTCTATATGCATAGGAAAGCCATGACGTATATGGCACTCTGtagacatttttaataatctctttattttcctttttttcaatttcaatgagAATCACTGAAAGTAAAATCtttccaacaaaataaaataaaacacaacattaatttaaacactTGACAACAGTTCTCAGTCTattcttaaatttaaaaagtggacAGGTGACAAAAGTTTCACACATCCATCTTTGTAAAGCAAGCTTGATTGAGGAGAAATGTCCAGTTTGCTTTTCACAAAACCccaaagaaaaaatgtgttatctcaatgttcttgatttttgtttttacattatgaGCATTCACTGTACTCTTACAAACTGTTTCAACAGGTCTACC

Function

GO: NA

KEGG:

id description
K06834 ADAM9; disintegrin and metalloproteinase domain-containing protein 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00020995 True 4797 mRNA 0.43 20 40490686 40530054

Neighbor

gene id symbol gene type direction distance location
AMCG00020994 NA coding upstream 33914 40437338 ~ 40456772 (+)
AMCG00020987 NA coding upstream 58926 40398936 ~ 40431760 (+)
AMCG00020989 NA coding upstream 104051 40369234 ~ 40386635 (+)
AMCG00020988 fgf17,LOC106585328,LOC106580010 coding upstream 170963 40311520 ~ 40319723 (+)
AMCG00020990 NA coding upstream 206190 40277322 ~ 40284496 (+)
AMCG00020996 NA coding downstream 14036 40544090 ~ 40554656 (+)
AMCG00020999 NA coding downstream 228443 40758497 ~ 40799108 (+)
AMCG00021000 NA coding downstream 292515 40822569 ~ 40838773 (+)
AMCG00021002 NA coding downstream 380381 40910435 ~ 40913147 (+)
AMCG00021001 NA coding downstream 394393 40924447 ~ 40939566 (+)
G67048 NA non-coding upstream 741325 39749157 ~ 39749361 (+)
G67027 NA non-coding upstream 1185099 39305297 ~ 39305587 (+)
G66995 NA non-coding upstream 1441055 39049421 ~ 39049631 (+)
G66970 NA non-coding upstream 1479837 39010579 ~ 39010849 (+)
G66887 NA non-coding upstream 2065434 38424712 ~ 38425252 (+)
G67180 NA non-coding downstream 40273 40570327 ~ 40571722 (+)
G67182 NA non-coding downstream 43500 40573554 ~ 40574856 (+)
G67207 NA non-coding downstream 255707 40785761 ~ 40791471 (+)
G67221 ppp3ccb,LOC107678020,LOC107553709,LOC107720725,LOC107586120,LOC107705087,LOC103046193 non-coding downstream 420045 40950099 ~ 40965912 (+)
G67272 NA non-coding downstream 508800 41038854 ~ 41039096 (+)
G67108 LOC100846954 other upstream 168865 40321113 ~ 40321821 (+)
AMCG00020954 NA other upstream 2353613 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 2914830 37567036 ~ 37575856 (+)
G66551 NA other upstream 3573250 36914815 ~ 36917436 (+)
G66506 NA other upstream 4234175 36254699 ~ 36256511 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other downstream 25912 40555966 ~ 40570215 (+)
AMCG00021005 LOC106580519 other downstream 521418 41051472 ~ 41062527 (+)
G67323 NA other downstream 1068169 41598223 ~ 41602113 (+)
G67459 NA other downstream 1522876 42052930 ~ 42053675 (+)
AMCG00021029 sfrp1,LOC104937559,LOC106585130,LOC105889956 other downstream 1893289 42423343 ~ 42465886 (+)

Expression


Co-expression Network