AMCG00021008


Basic Information

Item Value
gene id AMCG00021008
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41366724 ~ 41367357 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021008
atggCGGGAAAAGAGAGTGAGTCTCGGAGTCTGAGAGGATCTTACTTACACCAAAACAAGGCTTCCAAAACTTTGTTCGAGCACTCAATCCACGTGAGCAATCGCATTGCTAAGCTTTATGATAACACTGCCAAGAGTGTGAAAGTCTCACTAAACAATCGATCTGTGGCCTTGACAACAGATGGATGGACTTCTCtacacactgatgcacatgtCACAGTCACTGCACATTTTATATCAGATGACTGGGAAATCAAAAACTATCTGATGAAAACAGAAGAGCTGAGAGAAAGTCATACTGGCGAAAAATGTGATGTCAAACTGGGGCATTTGATGTCAAACTGGATGACTACGGATAATGCGGGGAATTATGTGAAGGCAGTTGAGAGTCATATGAGACGAGTGAACATTCCATGTTTGGCGCACACACTAAATCTGGCTGTATGTAAGGGGCTTCGTGGTGTTCGAGCAATCAAAATGGCGACCGCTGCCCATTTCAGCAAGTCAGCTGTTGACAGCTACCTGCtcgagaagaaacaaaaactactCAAAGTTAAATCGGACAAGCTTATCAATGACTGCTCGACCCGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021008 True 594 mRNA 0.44 3 41366724 41367357

Neighbor

gene id symbol gene type direction distance location
AMCG00021006 NA coding downstream 224030 41092869 ~ 41142694 (-)
AMCG00021003 NA coding downstream 362530 41000180 ~ 41004194 (-)
AMCG00021004 NA coding downstream 367066 40997807 ~ 40999658 (-)
AMCG00020998 LOC103141401,LOC108234925,LOC104934772,LOC106944545,LOC106529513 coding downstream 637098 40661926 ~ 40729626 (-)
AMCG00020992 NA coding downstream 836114 40530158 ~ 40530610 (-)
AMCG00021026 LOC108425180,LOC103036397,LOC106567972,LOC105015192 coding upstream 306252 41673609 ~ 41687703 (-)
AMCG00021027 NA coding upstream 607502 41974859 ~ 41975161 (-)
AMCG00021028 NA coding upstream 633292 42000649 ~ 42117898 (-)
AMCG00021031 slc25a37,LOC107393770,LOC103371456,LOC106585578 coding upstream 869884 42237241 ~ 42238378 (-)
AMCG00021032 slc25a37,LOC107093885 coding upstream 878640 42245997 ~ 42269261 (-)
G67298 NA non-coding downstream 102255 41256169 ~ 41264469 (-)
G67283 NA non-coding downstream 263500 41102719 ~ 41103224 (-)
G67277 NA non-coding downstream 314186 41051484 ~ 41052538 (-)
G67273 NA non-coding downstream 327628 41038808 ~ 41039096 (-)
G67246 NA non-coding downstream 462607 40841103 ~ 40904117 (-)
G67334 NA non-coding upstream 92106 41459463 ~ 41469248 (-)
G67339 NA non-coding upstream 106948 41474305 ~ 41481139 (-)
G67352 NA non-coding upstream 140362 41507719 ~ 41508093 (-)
G67358 NA non-coding upstream 151360 41518717 ~ 41520497 (-)
G67360 NA non-coding upstream 183058 41550415 ~ 41570291 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other downstream 726385 40557130 ~ 40640339 (-)
AMCG00020970 NA other downstream 2261857 39047704 ~ 39104867 (-)
AMCG00020943 NA other downstream 3734148 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 4298919 37061595 ~ 37067805 (-)
AMCG00020923 whsc1l1,LOC107720716,LOC107687514,LOC107705078 other downstream 4320785 37020011 ~ 37045939 (-)
AMCG00021012 NA other upstream 228723 41596080 ~ 41602270 (-)

Expression


Co-expression Network