AMCG00021013


Basic Information

Item Value
gene id AMCG00021013
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41630679 ~ 41631432 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021013
agcAGAAGCACTATTGCAAGGGTGTCCAGTGGGGGGAGCCTCACTGTCTATCCAGAGAGATTCAGGGGAAGAGTGCGCTGGGACAGTGAGACTGGCTTCTTCTACATCACAGAGCTCAATACACAAGACACGGGGTATTACACAGTTCACAATACAACCGGAAGTGGCTCAATCACAACCTTTCACCTGGCTGTGTACACGACTCAGTCATCTGCCAGCCAGACTGACATCCAAGAGGTGAAAGGCATTGTGGGAGGCACGGCCACTTTTGAAACCAGAGTATCCATAGGGCttattaaacacacagaaagcAGAAGCACTATTGCAAGGGTGTCCAGTGGAGGGAGTGTCACTGTGTATTCAGAGAGGTTCAGAGGGAGAGTGCGCTGGGACAGTGAGACTGGCTTATTCTACATCACAGAGCTCCAAACACAAGACTCTGGGGAATACACAGTACTAAATGTAGCAGGATATTCTCTCACCACCTTCCACCTGTCTGTGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021013 True 504 mRNA 0.50 2 41630679 41631432

Neighbor

gene id symbol gene type direction distance location
AMCG00021009 NA coding upstream 41660 41578384 ~ 41589019 (+)
AMCG00021016 NA coding upstream 111834 41459477 ~ 41518845 (+)
AMCG00021014 ube2d4,UBE2D4,LOC108265473,LOC103381447,LOC107717106 coding upstream 260261 41368627 ~ 41370418 (+)
AMCG00021011 tcf7l1,LOC106585616 coding upstream 331514 41284934 ~ 41299165 (+)
AMCG00021010 NA coding upstream 418630 41211431 ~ 41212049 (+)
AMCG00021015 npy8ar,LOC105911411 coding downstream 26238 41657670 ~ 41658791 (+)
AMCG00021021 NA coding downstream 69433 41700865 ~ 41709287 (+)
AMCG00021020 NA coding downstream 78046 41709478 ~ 41710229 (+)
AMCG00021022 NA coding downstream 80489 41711921 ~ 41740137 (+)
AMCG00021018 gpat4,LOC102786815,LOC106585610 coding downstream 124073 41755505 ~ 41782847 (+)
G67371 NA non-coding upstream 11070 41619295 ~ 41619609 (+)
G67322 NA non-coding upstream 122578 41507607 ~ 41508101 (+)
G67310 NA non-coding upstream 233005 41332266 ~ 41397674 (+)
G67309 LOC105030512,LOC106569888 non-coding upstream 325458 41304187 ~ 41305221 (+)
G67272 NA non-coding upstream 591583 41038854 ~ 41039096 (+)
G67393 NA non-coding downstream 105815 41737247 ~ 41854669 (+)
G67398 NA non-coding downstream 259239 41890671 ~ 41893979 (+)
G67405 NA non-coding downstream 353179 41984611 ~ 41985031 (+)
G67479 NA non-coding downstream 518127 42149559 ~ 42149967 (+)
G67519 NA non-coding downstream 764293 42395725 ~ 42395996 (+)
G67323 NA other upstream 28566 41598223 ~ 41602113 (+)
AMCG00021005 LOC106580519 other upstream 568152 41051472 ~ 41062527 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other upstream 1060464 40555966 ~ 40570215 (+)
G67108 LOC100846954 other upstream 1308858 40321113 ~ 40321821 (+)
AMCG00020954 NA other upstream 3493606 38117062 ~ 38137073 (+)
G67459 NA other downstream 421498 42052930 ~ 42053675 (+)
AMCG00021029 sfrp1,LOC104937559,LOC106585130,LOC105889956 other downstream 791911 42423343 ~ 42465886 (+)

Expression


Co-expression Network