AMCG00021016


Basic Information

Item Value
gene id AMCG00021016
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 41459477 ~ 41518845 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021016
ATGGTGGAGGAGTTGAGCAGTGGGAAGGTGATGTATGCATTCTGTCGTGTGCAGGACCCCAACTCTGGACTCCCCAAATATGTCCTTATCAACTGGGGGGCCCATGTGACAGTCAATGCTCGTGCGGAGGAGGATGTGGAGCCTGAGGTCATCATGCAGAAAGTGGCCAAAGCATCAGGTGCCAACTACAGTTTCCATAAGGAATCTAATCGCTTCCGAGACTCGGGACCACAGGGACCAGTGggATCGGTGTATCAGAAGACCAATGCAATGTCTGAAATTAAAAGGACCAACAAGGATAATTTCTGGGCCCAGGCTGAGAAAGATGAAGAGAAGCGGCGGCAGGAAGAGCGTCTAaaggtggaggaggagaggcaGCGTTTGGATCAAGAGAGGAAGGCAAGAGAATCTCTGGAGgcaacagaaagagagaagcGAGACAAGGAAAGGGCTAGCCAGATTGATCAGCAGAAGAAGAACCAGCAGAAGCAGGATACTCAGGACAGAGACCAGGAGAAACAGCAGTGGGAAGACCAGGAGAGGGAGCACCAGGCTGTCCAGAGGAAGGGCTTCAAACGCAGTGAATCAGTGGAGAAAGCCAATGAAGCTGCTTCTGTCATCTCCCAGCGCTCAGTGAACCCTAGGGACATATTCAAGCAGAGAGAGCGAGGTACGCCTAAGGACAACAGAGACGTGGCTGTCAACTCACAGCCAGGGCGGTTACATAGTCCCTTTCTGTCAAACCACCCTGGTGAGCCAGAGCACCCCAGCTCTCCCCTGCGCCAAACATCACCTGTGCCCGCCTCGCCTGCCTCTCCTTCCCGCGCCACAGAGCCCACTGTCTTGGAGCAGGCCCGGTCCCATTATGTGGAACCTGAGAAGCCTCCTCAGGATGAATGGCaagCTGATGACACAGAGATTTCTTTCGACCCTGATGACATCATCACTGGGATTGAGATGATTGATGAAGGCTGGTGGCGAGGCTATGGCCCTGATGGAGGGTTTGGGATGTTCCCAGCCAATTACGTGGAACTTCTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021016 True 1041 mRNA 0.54 10 41459477 41518845

Neighbor

gene id symbol gene type direction distance location
AMCG00021014 ube2d4,UBE2D4,LOC108265473,LOC103381447,LOC107717106 coding upstream 89059 41368627 ~ 41370418 (+)
AMCG00021011 tcf7l1,LOC106585616 coding upstream 160312 41284934 ~ 41299165 (+)
AMCG00021010 NA coding upstream 247428 41211431 ~ 41212049 (+)
AMCG00021007 NA coding upstream 343881 41091233 ~ 41115596 (+)
AMCG00021001 NA coding upstream 519911 40924447 ~ 40939566 (+)
AMCG00021009 NA coding downstream 59539 41578384 ~ 41589019 (+)
AMCG00021013 NA coding downstream 111834 41630679 ~ 41631432 (+)
AMCG00021015 npy8ar,LOC105911411 coding downstream 138825 41657670 ~ 41658791 (+)
AMCG00021021 NA coding downstream 182020 41700865 ~ 41709287 (+)
AMCG00021020 NA coding downstream 190633 41709478 ~ 41710229 (+)
G67310 NA non-coding upstream 61803 41332266 ~ 41397674 (+)
G67309 LOC105030512,LOC106569888 non-coding upstream 154256 41304187 ~ 41305221 (+)
G67272 NA non-coding upstream 420381 41038854 ~ 41039096 (+)
G67221 ppp3ccb,LOC107678020,LOC107553709,LOC107720725,LOC107586120,LOC107705087,LOC103046193 non-coding upstream 493565 40950099 ~ 40965912 (+)
G67207 NA non-coding upstream 668006 40785761 ~ 40791471 (+)
G67371 NA non-coding downstream 100450 41619295 ~ 41619609 (+)
G67393 NA non-coding downstream 218402 41737247 ~ 41854669 (+)
G67398 NA non-coding downstream 371826 41890671 ~ 41893979 (+)
G67405 NA non-coding downstream 465766 41984611 ~ 41985031 (+)
G67479 NA non-coding downstream 630714 42149559 ~ 42149967 (+)
AMCG00021005 LOC106580519 other upstream 396950 41051472 ~ 41062527 (+)
AMCG00020993 atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 other upstream 889262 40555966 ~ 40570215 (+)
G67108 LOC100846954 other upstream 1137656 40321113 ~ 40321821 (+)
AMCG00020954 NA other upstream 3322404 38117062 ~ 38137073 (+)
AMCG00020942 NA other upstream 3883621 37567036 ~ 37575856 (+)
G67323 NA other downstream 79378 41598223 ~ 41602113 (+)
G67459 NA other downstream 534085 42052930 ~ 42053675 (+)
AMCG00021029 sfrp1,LOC104937559,LOC106585130,LOC105889956 other downstream 904498 42423343 ~ 42465886 (+)

Expression


Co-expression Network