Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00021020 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 41709478 ~ 41710229 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00021020 | True | 657 | mRNA | 0.43 | 2 | 41709478 | 41710229 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00021021 | NA | coding | upstream | 191 | 41700865 ~ 41709287 (+) |
| AMCG00021015 | npy8ar,LOC105911411 | coding | upstream | 50687 | 41657670 ~ 41658791 (+) |
| AMCG00021013 | NA | coding | upstream | 78046 | 41630679 ~ 41631432 (+) |
| AMCG00021009 | NA | coding | upstream | 120459 | 41578384 ~ 41589019 (+) |
| AMCG00021016 | NA | coding | upstream | 190633 | 41459477 ~ 41518845 (+) |
| AMCG00021022 | NA | coding | downstream | 1692 | 41711921 ~ 41740137 (+) |
| AMCG00021018 | gpat4,LOC102786815,LOC106585610 | coding | downstream | 45276 | 41755505 ~ 41782847 (+) |
| AMCG00021017 | LOC106585609 | coding | downstream | 130802 | 41841031 ~ 41861878 (+) |
| AMCG00021019 | NA | coding | downstream | 184604 | 41894833 ~ 41934745 (+) |
| AMCG00021023 | NA | coding | downstream | 273154 | 41983383 ~ 42015154 (+) |
| G67371 | NA | non-coding | upstream | 89869 | 41619295 ~ 41619609 (+) |
| G67322 | NA | non-coding | upstream | 201377 | 41507607 ~ 41508101 (+) |
| G67310 | NA | non-coding | upstream | 311804 | 41332266 ~ 41397674 (+) |
| G67309 | LOC105030512,LOC106569888 | non-coding | upstream | 404257 | 41304187 ~ 41305221 (+) |
| G67272 | NA | non-coding | upstream | 670382 | 41038854 ~ 41039096 (+) |
| G67393 | NA | non-coding | downstream | 27018 | 41737247 ~ 41854669 (+) |
| G67398 | NA | non-coding | downstream | 180442 | 41890671 ~ 41893979 (+) |
| G67405 | NA | non-coding | downstream | 274382 | 41984611 ~ 41985031 (+) |
| G67479 | NA | non-coding | downstream | 439330 | 42149559 ~ 42149967 (+) |
| G67519 | NA | non-coding | downstream | 685496 | 42395725 ~ 42395996 (+) |
| G67323 | NA | other | upstream | 107365 | 41598223 ~ 41602113 (+) |
| AMCG00021005 | LOC106580519 | other | upstream | 646951 | 41051472 ~ 41062527 (+) |
| AMCG00020993 | atad1,atad1a,LOC105014378,LOC108414574,LOC106580455,LOC103365845,LOC107087860,LOC102796919,LOC101479261,LOC100705680,LOC106527948,LOC105919473 | other | upstream | 1139263 | 40555966 ~ 40570215 (+) |
| G67108 | LOC100846954 | other | upstream | 1387657 | 40321113 ~ 40321821 (+) |
| AMCG00020954 | NA | other | upstream | 3572405 | 38117062 ~ 38137073 (+) |
| G67459 | NA | other | downstream | 342701 | 42052930 ~ 42053675 (+) |
| AMCG00021029 | sfrp1,LOC104937559,LOC106585130,LOC105889956 | other | downstream | 713114 | 42423343 ~ 42465886 (+) |
