AMCG00021028


Basic Information

Item Value
gene id AMCG00021028
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 42000649 ~ 42117898 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00021028
ATGTTGAGGAAGTCAAGAGGTAGCGGCGCCAGGCTGCAATGCTTGGCTGGGGCCGAGACGACCAGGAAGAGCCAGGAAGAGAGCCTTTATCATCTCCTAATGAGCTCTATCTCTGCAGGATTAGACAGGCTCCTCTGTGACAGTGGGACCTGCTTTGCTAGCCATATTGGGTGCTGCGGGCTCAGTGACTTCCTCTGCCTGGGACACAAGGACAGGGGAGGGCAGGAGAAAGCAGGGGAAGACAGGGAAGAGCAAGAGCTGCCCCAGCTCTCATCCTATTCTCCAGCAGGGTTGGTGGGCTCCCTGCGCAAGCTTGGTTGGATCTTGAACATGTGGGATCCTGGCCAACGCCAACTCCCATGCCCATCAGCCCCAGCTGAAGAGGTGGAGGAGGCAGAAGAGGCAGGGCAGGGCTTGCTCTGCAACAGCTGGAACAGCATAGACATCTCGGGCCCCAGCCTGGACACCAGATTACTCCTGACCACACTCACGCGGTGTCGCGCAGTAGTGACACTGACAGAGACCATCAATTCTGACCAGCAGGTAACAGACGTGATCATATGCACCGCTTCAGGATACCGTTTGgcaaGTGAGTTTCTGACCAGGATGAGGGACTACATGCCTCATTCCCACAAACAGCTGATTGAGGCACTGTCTCGTGGCCCCTCCCTGCGCCAGTATGTCCTAGAAAGTGCTCAGCCAAAACTGATGCAGGCCTTCAACAGCTGTGTGTCCCAACTGCTCTCACTGCGCAACTACCACATCATCATTGTCAGCCGTTTCATCAGTGTGCCAGCCGCCAGAGCCAGGCAGATGCAGGTGCAGGGGGAGCAGTCTGTCCACGCCCCCTTAGCACTAGAGGACAGGGGCACAGGCGGCTCCAGAATCATGAGCTTCCTGAAGACTGTACGAGACCAAACCATAGACAGCTCCATTGCCCCCACCCAACCACTTGACTCTGAGCACTGA

Function

GO: NA

KEGG:

id description
ko00350 Tyrosine metabolism
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00021028 True 969 mRNA 0.57 4 42000649 42117898

Neighbor

gene id symbol gene type direction distance location
AMCG00021027 NA coding downstream 25488 41974859 ~ 41975161 (-)
AMCG00021026 LOC108425180,LOC103036397,LOC106567972,LOC105015192 coding downstream 312946 41673609 ~ 41687703 (-)
AMCG00021008 NA coding downstream 633292 41366724 ~ 41367357 (-)
AMCG00021006 NA coding downstream 857955 41092869 ~ 41142694 (-)
AMCG00021003 NA coding downstream 996455 41000180 ~ 41004194 (-)
AMCG00021031 slc25a37,LOC107393770,LOC103371456,LOC106585578 coding upstream 119343 42237241 ~ 42238378 (-)
AMCG00021032 slc25a37,LOC107093885 coding upstream 128099 42245997 ~ 42269261 (-)
AMCG00021030 NA coding upstream 185028 42302926 ~ 42315442 (-)
AMCG00021033 golga7,LOC106585131,LOC104937560 coding upstream 204209 42322107 ~ 42350197 (-)
G67440 NA non-coding downstream 106665 41891038 ~ 41893984 (-)
G67368 NA non-coding downstream 407920 41592521 ~ 41592729 (-)
G67360 NA non-coding downstream 430358 41550415 ~ 41570291 (-)
G67358 NA non-coding downstream 480152 41518717 ~ 41520497 (-)
G67352 NA non-coding downstream 492556 41507719 ~ 41508093 (-)
G67480 NA non-coding upstream 31695 42149593 ~ 42149966 (-)
G67522 NA non-coding upstream 285923 42403821 ~ 42404270 (-)
G67534 NA non-coding upstream 365687 42483585 ~ 42484218 (-)
G67537 NA non-coding upstream 467929 42585827 ~ 42586109 (-)
G67565 NA non-coding upstream 774238 42892136 ~ 42892423 (-)
AMCG00021012 NA other downstream 398379 41596080 ~ 41602270 (-)
AMCG00020997 atad1a,LOC106580455,LOC105890049,LOC105014378,LOC107656802,LOC108414574 other downstream 1360310 40557130 ~ 40640339 (-)
AMCG00020970 NA other downstream 2895782 39047704 ~ 39104867 (-)
AMCG00020943 NA other downstream 4368073 37631777 ~ 37632576 (-)
AMCG00020922 NA other downstream 4932844 37061595 ~ 37067805 (-)

Expression


Co-expression Network