G59289


Basic Information

Item Value
gene id G59289
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 219605 ~ 220375 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74150
cacctatatatataaggtcccacagttaacagtgcatgtcagagcacaaaccaatccatgaagtccaaggaattgtctgtagacctctgagacaggattgtatcaaggcacagatctggggaagggaaCAGAAAAAatttggggggtggatgaggaacctcaccatgtcatttggtaggtctggtcgctgaggtaggaggagaaccaggtgagagcagtcccagagattccaaggtcagcgaggcaggagaggaggatggagtgatcaacggtgtcaaatgctgcggagaggtcaaggaggatgaggactgaggagagggaggccgcctgaGGACAtgtgagggagtcagtgactgccaggagagccgtctcagtggagtgagctgtgcggaagccggattgcaaggatcaaggagtgagtgttgggacagaaagtcagagagctgacagtggaccgcCTGCTccagagtctttgagaggaaggggagtagggagacagggcggtagttctgaggagaggtggcatcaagggttggtttcttgagtgggatgacagcagcttgtttgaGTGccgaggggaaacagccagagatgagtgaggagttgaggagggccgagatgaaggggagaagatcaggagcagtcacttggaggaggcgagaagggagagggtccagggcacatgttgtaggtttgtgacgtaggaggagagcggaaacttcagcatctgagagaggtgagaatgaagaaaaggaagcttaaTCGGTGGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74150 True 771 lncRNA 0.53 1 219605 220375

Neighbor

gene id symbol gene type direction distance location
AMCG00019873 NA coding upstream 115957 77166 ~ 103648 (+)
AMCG00019872 NA coding upstream 144342 48107 ~ 75263 (+)
AMCG00019874 NA coding downstream 19984 240359 ~ 270653 (+)
AMCG00019876 NA coding downstream 60966 281341 ~ 297312 (+)
AMCG00019877 NA coding downstream 164651 385026 ~ 418105 (+)
AMCG00019879 trim32,LOC107728008,LOC107564424 coding downstream 353383 573758 ~ 575695 (+)
AMCG00019885 NA coding downstream 904159 1124534 ~ 1128690 (+)
G59299 NA non-coding downstream 25537 245912 ~ 246217 (+)
G59304 NA non-coding downstream 47373 267748 ~ 267963 (+)
G59306 NA non-coding downstream 225257 445632 ~ 446858 (+)
G59351 NA non-coding downstream 711926 932301 ~ 1002892 (+)
G59381 NA non-coding downstream 964908 1185283 ~ 1186234 (+)
G59305 NA other downstream 221223 441598 ~ 445530 (+)
AMCG00019884 NA other downstream 854441 1074816 ~ 1108996 (+)
AMCG00019920 NA other downstream 2742133 2962508 ~ 2969595 (+)
AMCG00019934 NA other downstream 3020933 3241308 ~ 3251407 (+)
AMCG00019967 prrc2b other downstream 4603438 4823813 ~ 4856929 (+)

Expression


Co-expression Network