G59299


Basic Information

Item Value
gene id G59299
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 245912 ~ 246217 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74160
tggaaatctaagtatatcatatcatatgctttcacatgatctacagctgcaattCTAATAAAtcagtaagacatgatctgccttgtctaaacccatgttgactatatccaagaatatggttttcattaagatgctcctctattttctgtctaaacattttacaggtgatgcaggtgagactgattggtctgtaatttcctggctcagttttgtcccctttcttgtggattggtatgacatttgctgtcttccagtcagttggcacatccactgttctaagtgtcatttggaatatttgagttagcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74160 True 306 lncRNA 0.38 1 245912 246217

Neighbor

gene id symbol gene type direction distance location
AMCG00019873 NA coding upstream 142264 77166 ~ 103648 (+)
AMCG00019872 NA coding upstream 170649 48107 ~ 75263 (+)
AMCG00019876 NA coding downstream 35124 281341 ~ 297312 (+)
AMCG00019877 NA coding downstream 138809 385026 ~ 418105 (+)
AMCG00019879 trim32,LOC107728008,LOC107564424 coding downstream 327541 573758 ~ 575695 (+)
AMCG00019885 NA coding downstream 878317 1124534 ~ 1128690 (+)
AMCG00019886 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 coding downstream 1338806 1585023 ~ 1585622 (+)
G59289 NA non-coding upstream 25537 219605 ~ 220375 (+)
G59304 NA non-coding downstream 21531 267748 ~ 267963 (+)
G59306 NA non-coding downstream 199415 445632 ~ 446858 (+)
G59351 NA non-coding downstream 686084 932301 ~ 1002892 (+)
G59381 NA non-coding downstream 939066 1185283 ~ 1186234 (+)
G59385 NA non-coding downstream 982729 1228946 ~ 1229205 (+)
G59305 NA other downstream 195381 441598 ~ 445530 (+)
AMCG00019884 NA other downstream 828599 1074816 ~ 1108996 (+)
AMCG00019920 NA other downstream 2716291 2962508 ~ 2969595 (+)
AMCG00019934 NA other downstream 2995091 3241308 ~ 3251407 (+)
AMCG00019967 prrc2b other downstream 4577596 4823813 ~ 4856929 (+)

Expression


Co-expression Network