G59402


Basic Information

Item Value
gene id G59402
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 1493685 ~ 1493889 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74278
caaggatcctatccagtctgtttttgaatgttcccaaatagtctcttcagccacatcgctggggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74278 True 205 lncRNA 0.48 1 1493685 1493889

Neighbor

gene id symbol gene type direction distance location
AMCG00019885 NA coding upstream 364995 1124534 ~ 1128690 (+)
AMCG00019879 trim32,LOC107728008,LOC107564424 coding upstream 917990 573758 ~ 575695 (+)
AMCG00019877 NA coding upstream 1075580 385026 ~ 418105 (+)
AMCG00019876 NA coding upstream 1196373 281341 ~ 297312 (+)
AMCG00019874 NA coding upstream 1223032 240359 ~ 270653 (+)
AMCG00019886 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 coding downstream 91134 1585023 ~ 1585622 (+)
AMCG00019894 NA coding downstream 780490 2274379 ~ 2327335 (+)
AMCG00019893 lhx3 coding downstream 846899 2340788 ~ 2351023 (+)
AMCG00019898 cunh9orf69,c5h9orf69,lg14h9orf69,LOC106563262,LOC106565885 coding downstream 920975 2414864 ~ 2416601 (+)
AMCG00019896 NA coding downstream 949362 2443251 ~ 2454771 (+)
G59387 NA non-coding upstream 228946 1264492 ~ 1264739 (+)
G59385 NA non-coding upstream 264480 1228946 ~ 1229205 (+)
G59381 NA non-coding upstream 307451 1185283 ~ 1186234 (+)
G59351 NA non-coding upstream 490793 932301 ~ 1002892 (+)
G59306 NA non-coding upstream 1046827 445632 ~ 446858 (+)
G59411 NA non-coding downstream 115128 1609017 ~ 1609373 (+)
G59425 NA non-coding downstream 303037 1796926 ~ 1797141 (+)
G59440 NA non-coding downstream 540672 2034561 ~ 2034794 (+)
G59459 NA non-coding downstream 668046 2161935 ~ 2163604 (+)
G59460 NA non-coding downstream 670632 2164521 ~ 2167440 (+)
AMCG00019884 NA other upstream 384689 1074816 ~ 1108996 (+)
G59305 NA other upstream 1048155 441598 ~ 445530 (+)
AMCG00019920 NA other downstream 1468619 2962508 ~ 2969595 (+)
AMCG00019934 NA other downstream 1747419 3241308 ~ 3251407 (+)
AMCG00019967 prrc2b other downstream 3329924 4823813 ~ 4856929 (+)
G60137 NA other downstream 3861883 5355772 ~ 5361863 (+)
G60132 NA other downstream 3864575 5358464 ~ 5359365 (+)

Expression


Co-expression Network