Gene
RNA
| Item | Value |
|---|---|
| gene id | G59459 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030127.1 |
| NCBI id | CM030127.1 |
| chromosome length | 42978078 |
| location | 2161935 ~ 2163604 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | name | namespace |
|---|---|---|
| GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
| GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
| GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
| GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
| GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
| GO:1990351 | transporter complex | cellular_component |
| GO:0034702 | ion channel complex | cellular_component |
| GO:0034703 | cation channel complex | cellular_component |
| GO:0034704 | calcium channel complex | cellular_component |
| GO:0005891 | voltage-gated calcium channel complex | cellular_component |
| GO:1902495 | transmembrane transporter complex | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU74340 | True | 1380 | lncRNA | 0.46 | 2 | 2161935 | 2163604 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00019886 | LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 | coding | upstream | 576313 | 1585023 ~ 1585622 (+) |
| AMCG00019885 | NA | coding | upstream | 1033245 | 1124534 ~ 1128690 (+) |
| AMCG00019879 | trim32,LOC107728008,LOC107564424 | coding | upstream | 1586240 | 573758 ~ 575695 (+) |
| AMCG00019877 | NA | coding | upstream | 1743830 | 385026 ~ 418105 (+) |
| AMCG00019876 | NA | coding | upstream | 1864623 | 281341 ~ 297312 (+) |
| AMCG00019894 | NA | coding | downstream | 110775 | 2274379 ~ 2327335 (+) |
| AMCG00019893 | lhx3 | coding | downstream | 177184 | 2340788 ~ 2351023 (+) |
| AMCG00019898 | cunh9orf69,c5h9orf69,lg14h9orf69,LOC106563262,LOC106565885 | coding | downstream | 251260 | 2414864 ~ 2416601 (+) |
| AMCG00019896 | NA | coding | downstream | 279647 | 2443251 ~ 2454771 (+) |
| AMCG00019897 | NA | coding | downstream | 318301 | 2481905 ~ 2483959 (+) |
| G59440 | NA | non-coding | upstream | 127141 | 2034561 ~ 2034794 (+) |
| G59425 | NA | non-coding | upstream | 364794 | 1796926 ~ 1797141 (+) |
| G59411 | NA | non-coding | upstream | 552562 | 1609017 ~ 1609373 (+) |
| G59402 | NA | non-coding | upstream | 668046 | 1493685 ~ 1493889 (+) |
| G59387 | NA | non-coding | upstream | 897196 | 1264492 ~ 1264739 (+) |
| G59460 | NA | non-coding | downstream | 917 | 2164521 ~ 2167440 (+) |
| G59467 | NA | non-coding | downstream | 16999 | 2180603 ~ 2181069 (+) |
| G59557 | NA | non-coding | downstream | 420090 | 2583694 ~ 2634130 (+) |
| G59578 | NA | non-coding | downstream | 551924 | 2715528 ~ 2716915 (+) |
| G59625 | NA | non-coding | downstream | 624306 | 2787910 ~ 2788239 (+) |
| AMCG00019884 | NA | other | upstream | 1052939 | 1074816 ~ 1108996 (+) |
| G59305 | NA | other | upstream | 1716405 | 441598 ~ 445530 (+) |
| AMCG00019920 | NA | other | downstream | 798904 | 2962508 ~ 2969595 (+) |
| AMCG00019934 | NA | other | downstream | 1077704 | 3241308 ~ 3251407 (+) |
| AMCG00019967 | prrc2b | other | downstream | 2660209 | 4823813 ~ 4856929 (+) |
| G60137 | NA | other | downstream | 3192168 | 5355772 ~ 5361863 (+) |
| G60132 | NA | other | downstream | 3194860 | 5358464 ~ 5359365 (+) |
