G59467


Basic Information

Item Value
gene id G59467
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2180603 ~ 2181069 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74348
ACGATGAGAGCCCTCTCCTGGTAGTACTTGGCGATGAGGCTGATGTTCTGTTTGAAGGTGTCCAGCCTCCTCTCGATGGCGTGGGCGTTGTCATCTGGCCGGCCTTGCTGGGTGGCCCTCTTCTCCAGGCGCTGGCGCAGCTGCTGATTGGAGCAGGCGAGCAGCACCACCAAGTCAGGGGAGCCAATCTGGGATGAGAAATTAGGACCATGTCAGTCTGATGTCAATGACAAGTCCATATGCTGGGCTACATGGTCCTCTCTCCATCATCATCTTTCTTGTGCTATGTTGTTTTCCTGAGAGATGTATATCTTAATGCAGGTTATTTTAGTCACCAGAGAGGATCAACCACAGAAGAATGACGGgacagcaagaaaacaaaccgTTCTTTGCTGAGCAATGTCTTATGTGTTTACAGTGATTTCACAAAACTGGTAGTACAGCAGTGTAGTGATGGACTATTTCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74348 True 467 lncRNA 0.49 1 2180603 2181069

Neighbor

gene id symbol gene type direction distance location
AMCG00019886 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 coding upstream 594981 1585023 ~ 1585622 (+)
AMCG00019885 NA coding upstream 1051913 1124534 ~ 1128690 (+)
AMCG00019879 trim32,LOC107728008,LOC107564424 coding upstream 1604908 573758 ~ 575695 (+)
AMCG00019877 NA coding upstream 1762498 385026 ~ 418105 (+)
AMCG00019876 NA coding upstream 1883291 281341 ~ 297312 (+)
AMCG00019894 NA coding downstream 93310 2274379 ~ 2327335 (+)
AMCG00019893 lhx3 coding downstream 159719 2340788 ~ 2351023 (+)
AMCG00019898 cunh9orf69,c5h9orf69,lg14h9orf69,LOC106563262,LOC106565885 coding downstream 233795 2414864 ~ 2416601 (+)
AMCG00019896 NA coding downstream 262182 2443251 ~ 2454771 (+)
AMCG00019897 NA coding downstream 300836 2481905 ~ 2483959 (+)
G59460 NA non-coding upstream 13163 2164521 ~ 2167440 (+)
G59459 NA non-coding upstream 16999 2161935 ~ 2163604 (+)
G59440 NA non-coding upstream 145809 2034561 ~ 2034794 (+)
G59425 NA non-coding upstream 383462 1796926 ~ 1797141 (+)
G59411 NA non-coding upstream 571230 1609017 ~ 1609373 (+)
G59557 NA non-coding downstream 402625 2583694 ~ 2634130 (+)
G59578 NA non-coding downstream 534459 2715528 ~ 2716915 (+)
G59625 NA non-coding downstream 606841 2787910 ~ 2788239 (+)
G59638 NA non-coding downstream 644522 2825591 ~ 2826637 (+)
G59646 NA non-coding downstream 702645 2883714 ~ 2885416 (+)
AMCG00019884 NA other upstream 1071607 1074816 ~ 1108996 (+)
G59305 NA other upstream 1735073 441598 ~ 445530 (+)
AMCG00019920 NA other downstream 781439 2962508 ~ 2969595 (+)
AMCG00019934 NA other downstream 1060239 3241308 ~ 3251407 (+)
AMCG00019967 prrc2b other downstream 2642744 4823813 ~ 4856929 (+)
G60137 NA other downstream 3174703 5355772 ~ 5361863 (+)
G60132 NA other downstream 3177395 5358464 ~ 5359365 (+)

Expression


Co-expression Network