G59505


Basic Information

Item Value
gene id G59505
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2324288 ~ 2327415 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74395
GGAAGACAGCGATTGCATCCTGGACTGCTCTCTCCAGCGTGGGGTCAAACTCGAAGCAAACCAACAAGAGGAGACGTTTAGTGCACACACCGCTTTTATTTCTGAacacaaatcatacatttatctCACATCAATTATTGTACAAAAATGTCATCTCCCTTTTGTACAGGAAAAATAGACGAACACAGAAAAAGCACTACACACAGACGTAATGCTGATCTCGAAACCCGAAACAAAAATGCGTCTCAGACGAATCCCAGAGCAGTCcttagcagcagcagcagcagcggcggcACAGGGACCCTCGTCAACGTGACTGAAACAAGCCCCCGTCCCACACAGGGCGTCCATCCGCTGTCCCTCGGGACGGGAAAGAGTGAGACCCATCCGCCCGGGGTTGAAGAAACGGACACCCGACATGGGGCGACCCACAGGACAGTTCGACAGCCACGTGTCCCGGGGAGGCCCATGTCTCCCAGATGCCTTTTGACAGTCCAAATCGCTCCAGTTCTCCGGCCTCAACGCAGCTTGATCCTGCTCCACTTGACACACTTAACCCATGGAAGTCTGGGCCTGATGTACGGAATCGGAGCTTCACGCCCATCGATGCTTCTGAACCCGATTTGAGAAATCTATAAGGACTCTAATCACACGGTGCTGAAAACCCCCGCTGAGATCTGAAGTTGAAATCTGCAGCACCCTGTATAGCATTGCTGGCACGGTGGCGAACGGATATCCGTCACGGGAGTCACGGCAGACGATAAGATTACCAGACAGCAACATGGACTGGGATGTCAAAGAGGGTTTTGAGTGATTGGGAGAGGTCCCCAAATACGGACAccacataattataatacaaaatcaaaactgatCTATGTTTGTGTGGTTTAGTTTCCTTGTGTGTGCACGTCTGCGTCTGTCTGTGCAcatgtgcgtctctctgtgtatgcgtgtgcgtgtgtctctctgtgcatgtgtgcatgcatgcatgcttgCGTGTCTCTCTGCGGGTGCCTGGGTGTGcatgtgtctctctgtgcatgtgtgtctctctgcgcgtgcctgtgtgtgtgtgtgtgcgcgcgtgtctctctgtgcgtgcgtgtgtgcgtgcatgcgtgcatgtgtgtgtgtctgtgtgtgtgcgtgcgtgtccTCACTGGGATTTGTACATTTCAGCAGTTAGCAATCAAGCGTCAAAGATgcttttataatattgttttcataggCCTTTACTAATGATCAGAGAAATGAAACGGCTATGTCACTTGGCTACGATTCTTCTTAACTTCCTTTTATTCCGTCTCTCCGCAGCACCGGCAGCAGCGGTCCAGGCGAGATCCTCAGAGACGGCAACGAATGGATCAATCCCGGTGTTCAGACTCGGGGTCTTACCTGCTCGAGCCGCTCAGACAGTTCACAAATCGGCTGCCGAGTTAAAGGCAGGCCCGGATCAACGCAGAGTCCCACGCGCATCCCCTGAACCGAGGAGCCCCCCAGAGTCGCGTTTGTGGATTGTGCACCGACAGTGGACTTCACTAGAGCAGTCACACAACGACTCAACACACTCATTGGCTTACAATCGTTCCTTGTGTCCCCTTGACAAAGTGTGCTCAGGTTGTCCCTGTTGTTGGAACGCTtcccaacaaaataaataaataagagaaatgACGTCTTTGTACAGGGCGTACGTTGGCGATCAAAGTGAAGGCAGCAGGAGCCAAACCGACAGTCTGACAGACTAACACTGGCTGCAGAGCCGGAGTGAAGGCACGGTTCGCCCCTTTTATTCTCAAGCGAAGAgagtcataaaaacaaaacacacacagacgacCCGAATAACACAAGTAACCGTGAAAATCAAAATGGCACGCTGACCTCCCGTTTAACAGCTGCCCCGCCTGCTCGGCACACGCCTGACCCGTTCCTCCCGGGCCGGTGGAGGAATTCTCCACACGGTCCTCCTTTAACACCCCAAAACCTCTGCATTCCAGATACACATCCCACTCTaagatctctctctcactgcaggGTTAGTTCTCCGCTGTAAACCGTCTTCCTGAGTAACAAGACCGGTGGGAACTGATGATGGGACGACGGAGGCAGGACGGGTTCCGATCACAGCCTCGCTTGGCTCAGATTCAGATCAACACACGCTATGGATCGGCGCTGCCTCGGACTCCTGTTCGCTTCCTCGCCCACAGcagtattcatttatttatgcatttcaacTCTGGACAGTAACACCGGAAGAGGCAGCTTTGACACAAACGTGAACAAAAGGACGGAGTTCACAGCGTATTTTACGTGACCGATGATTATGAAGACAGAAAATATGATTTACGTGCAGGGGTTGTATACAAAAGTTATCCTTTCCTATGGTAAACTATATTTGTACACAATGAAAACCTCTCCTTTCTCAGGGGGACAGGAGTAGCACTGGGGTGGGATTACAGCCCAGAACCACCACCAGAACACCGATTCCAAGAGCACCTGACTGGCCGGCCTGGCAGTAGCGGTGGTCCGGTGTGAGTTTTGAAAGCGAGGAAGCGAACGCAAGAGGCAAGGGCCACTGAAGAGATCTGTGCGAGTTTACTGTCCACGTTCAATTATAATAGGAGTTCAAAGCCTGGTGAACTTTCTTCACCTTCCCCCAGGTCCCCAACCCCACGTCCTCCCAGGACTCCTTCAGCACCAGCAAACTCCACCGAAGAACCCCAGGACAGGGTGATGGGGCCACCCCCGGGACCACGGGGCAGAGGATTCATCCATCGGGGAAACGACCGCCTTGAGATGCGCTCCTTCGTGCGCCAGTTCCAGttttaaagacaaatgcaaCGAAACCGAAAACAAAAACACCGAACAAAATCAAACGATAGAATAACTGGCGCCTCCTTCGCTGCGCTCCGTCTCTCGAGTCCGGGGCCGGGCTCCTCTCCTCTGCGCTATACATAGGGCCGGCCGTGTCTGAACTTCCACCGCTTGGAGCGCAtcctgaagaagaagaacatgACCATGAGGAAGACGCAGGAGGCAGCATACAGCAGCACGCACAGGCTCATGTCGACACTGGAGAAGCCCAGGCCCAGGAAGCTCATCCCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74395 True 3104 TUCP 0.52 2 2324288 2327415

Neighbor

gene id symbol gene type direction distance location
AMCG00019892 gpsm1,LOC106563264 coding downstream 77128 2226804 ~ 2247160 (-)
AMCG00019891 gpsm1,LOC106910217 coding downstream 111515 2211677 ~ 2212773 (-)
AMCG00019890 LOC107731024,LOC108423692,LOC107665022,LOC108255392,LOC107595531 coding downstream 139093 2160178 ~ 2185195 (-)
AMCG00019889 NA coding downstream 188349 2105830 ~ 2135939 (-)
AMCG00019888 brinp1,LOC107597955,LOC106563266 coding downstream 403533 1913441 ~ 1920755 (-)
AMCG00019899 NA coding upstream 136221 2463636 ~ 2479709 (-)
AMCG00019913 NA coding upstream 362487 2689902 ~ 2690317 (-)
AMCG00019914 NA coding upstream 377914 2705329 ~ 2705778 (-)
AMCG00019912 NA coding upstream 382547 2709962 ~ 2742168 (-)
AMCG00019911 rab14,Rab14,LOC105889591,LOC101069277,LOC107566859,LOC103390174,LOC103045876,LOC108259986 coding upstream 445154 2772569 ~ 2781304 (-)
G59485 NA non-coding downstream 103094 2195803 ~ 2221194 (-)
G59484 NA non-coding downstream 131741 2192334 ~ 2192547 (-)
G59414 NA non-coding downstream 662109 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 830315 1493686 ~ 1493973 (-)
G59396 NA non-coding downstream 927063 1389345 ~ 1397225 (-)
G59556 NA non-coding upstream 247389 2574804 ~ 2575670 (-)
G59810 NA non-coding upstream 1163303 3490718 ~ 3491049 (-)
G59825 ttll11,LOC107579646 non-coding upstream 1269790 3597205 ~ 3597760 (-)
G59827 NA non-coding upstream 1312623 3640038 ~ 3642114 (-)
G59826 NA non-coding upstream 1318624 3646039 ~ 3647334 (-)
G59408 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 other downstream 738288 1584919 ~ 1586000 (-)
AMCG00019880 NA other downstream 1751461 535831 ~ 572827 (-)
G59530 NA other upstream 127496 2454911 ~ 2480799 (-)
G59545 NA other upstream 167484 2494899 ~ 2507020 (-)
G59712 NA other upstream 704441 3031856 ~ 3034335 (-)
G59720 NA other upstream 780386 3107801 ~ 3111347 (-)
AMCG00019942 NA other upstream 838822 3166237 ~ 3185965 (-)

Expression


Co-expression Network