G59530


Basic Information

Item Value
gene id G59530
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2454911 ~ 2480799 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74434
ataattgcattaatgagaaattgaacaggtgttcctaataatcctttaggtgagtgtatatatatatatatatacaaacacacacacacatttctataGAGAACAAACTTTTAAACACGATAAAAGGTTATTTAATCAGAACTGTAAGTTCTGTAAGACTGAGTCATTTTATCtattaaaaaatagtatttcTCTTGTAAATTGCATTGAATGAATCATCGGGAGGACGTTCCCAAAGCCGCGGCCCAAGCGTTAACCAGGGCTTTagccgggagagagagagagagagagagagagagagagagagagagagaggaggatgaaTGGCCCTCCAGTCCAAGCTCGCACTGTTACGATCAGTGTTACAATAAGCCTGGACGACAGTCAGGACCCCCGAGAGCCTGCAGTGGACCCCCCCGTCCCCCCTCCCACATTCACCGCGTCAGGTTTTAGTCTCTCGTCATTCCTGTAAACGTCGCACAACTCCTTAGTGCAATAAAGCGCCAGGCCCCGTACGATCCGTACGGCACCGGTACAATCTCCTGTACAATCTCACACTTCTTCCATAGCCCCCCTCCCCGGACCCCCTCCAAACCCCAGTCCCCCCATCACCGTCTCTCTGAAGAAACCTGCAGTCTGACAGAATCTCCCCCTCGGGGAATCGATCCCAAAAGAAGATTTTGAAGCCAGGAATCGAGTCTAAAGGGACGCAGACAGACCTCGGGGGAATCCGGActaggatttgaacccagggTCGTCCTTCACTAGTTCCCCGTGTAAAGGAACGCTGTGTTTACAGCCAGTCGTCACCACAGTGTTTTCACGTGTCATACAACACGGGGCAGAACCTCTGCTGAGATAGAGCAGGTGTGGGAAGActggcaacaaaaacaaactgtgcaGGATTTCCCCCGAGACCTGGAGAGGCATCAATTCCTCCAGTGACTAGAGTaatcaatctatatatatatctggcaAGAGGATCTGAAAACATTGAAAGGAAAAATCccaaagaaaacagaacagaagtaTTTTGTGCATGGAAACCTCAGTTTGATTACCCAGTTCCTTTTCTTGAGAAGTTTGTGggttttttcctgtgtttttaatactCAAGTGATcacctaaaataataattgagtcCTGACTAGAGATTCTGTAAAGCTGCTGgactggaaagagagagagggagagggagagaggagacggAGGAGGCTCCTAGGCCCCAGTAGTACTCCATTAGACAGACTGGTGGTGTTgtgtgcaaaacaaaagcattaatTTCCAATTCTAcaatggcaaaaaaacaaacaaacaataaaatcacCTTGTCTGGGTCACATGGTTCAAAACGAAGGCCCTTATTTCAGCACCTTTTCCAAAAACCCTCTCGTTGTCTTTTGCTGTGACCCACTCAGGTCTTCCCAACATCCCGTCTCTGCGGGCCGCGGCCCCACACTCTCTGTTCCACAAGCGCCGTCAGGTTTGGTTTCGAATCTCACTGAGGAAACCAATCaagagaaaacaggagatccCCAAAAGCCAACAGGCGCATGTGACGCACAGCAgcgtttctgtttctttctgggACAAACGCGCCGCACTCTGGACAGTCAAGGAGACATAAAGGCAGTTCTGGGCGccgcaaaacaaagaaaacaaaaagaaaaaacacaccaaaaacgCCAGAGTGTCTTGGGCTGTTGCCTCTCACTTCGGCTTCACTCTTCCTGTTCAACAAAGGTTTACTCTTAGtcgtgtttttctctttctagtGCAAATGCAAGAAGCCAGCAGGAATTCGTATTTCCCCAAatccaatacaaaaataaaatgagtcgGTGAAGGAGGCGTGGAGTTTTCCAGCGACATTCTGCCCAACTCCGGTCTGAGCCTCACAGCACGGCAATGGAGGAAAACCCCTtagagcccccccccccttcaccGGTCAGAGAAAGTGCTTCacatccccacccccaccccggcCCCCCACCCAGGATCCCAACAGAAAAACAGTCTCACGTGTTAAATGTTACATCGTCAGGCAACTGCAGCAGCTTTTTGCAAGTTAGTGGCTTCATTGATTTATTCTCTATTAATTTTGCATGCAAGCGGCttgtggctctgtgtgtgtgtttgtgtgtgtgttgcgtgtgtgttgcgtgtgtgtgtgtgttatgtgtgttgtgtgtgttgcagggctCTGAGTGTGACTGGACCAGGCGTGTGTAAAGATGCGAGGAGCTTCTTCCAGCCTAGCCCATCTATACACAGTGACTCGGGCATGGACACTGGGCTCCCGAAGGGCCCCCAACACGTTCACCTTGAGGGCCCCTCTCTCCAACGGCCGACTCTACCGCCAGTAACGCAAACGCTCTGACTTCGTTTACCAGTTCTGCTCAGCCCCGCAGTTTCAACTCAGAACTGACTCGACAGTGTTTGAAAAGGAACGGCCTCTCTCTCGCCAGGACCCACGTCTCGCTCACATCAGTGCTATCGAGCGGAGTGAAAAAATCTCATATTGCCTAGTTTGAATCTCATCCTGTAAACTGTCATCTGCTGGAAACACAGGCGGCTCACTTGTGATTCTGCAGGCGTCTCTGTAGCTCTATCTCCTCGTACGGAATTGGGGGTTTTGATTTCCGCATTCGTATGAACGaactataaaacataattataattctGTTGTATTAATCAATCGGTCACAGTGCAACACGTGTTCTACATTTCTACAACATATCTAACCTCCATCGCACAAGCTGCTTCAACCTCTTTTGCGACGGGGCAAACCGAACTTCACTACCAAAGCTTTCACTTGAGTCTTATTAAGAAACGTCAGCTAGAAACGTCGTACAAGGCAGGCAGGTCAACATAATTATCTCCGTGACAAAATCGTATACGTAGGCAGCTTCTAATAGTCCGCACTGAACTCCTCTGTGAACAGAATTGGTGTTGCTGTTGTAGAAAGTGATCCTATTGAAACGTCGGTCCTACAGCGAACGCTGACGCACACTGCTATCGAGAGGTACGATGCTCTGTGATGAATTGTAAGAACTCGGCCTGTTCTGTGCCACATGCAGAGACTCGTTATCTGCACTCCAGCTGTACTTCTCCCACGTGGGGCGAGGAGAGACCACAGAGACCCGCGGCGCTTGCTGCACCAGAACCGCAGTGCGGGAGGGAACGACACGAGAGTATTCATCACGAGGAGGTGGAAAATGTAGATGCTCGAACGGGCCAGACTTTCCTCATTTAGTCTTTTCTCTGAATGCACTTTTGGTTATACAGGATGGTAGTGTATAGTTAGTAACATACTGTTGATTATGTCCACCCCGCTGTCtatttcaatttgaataataaCAGACGCAATCACAAAGCAGCTCTCTTCTCACACCGCCTTTCAGCGTGAGACACAGACCCCAGACCGGCCCGTGCCTCGGGGGCTGTCAGTGAGTGTAACCGTGTCGCGCTGCTCTTGTGAGACCGTGTGCATGAGGCATGtgtgtttaagtgtgtgtgCCGGCCAGGTAAAGCAGTGCTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74434 True 3543 TUCP 0.48 2 2454911 2480799

Neighbor

gene id symbol gene type direction distance location
AMCG00019892 gpsm1,LOC106563264 coding downstream 207751 2226804 ~ 2247160 (-)
AMCG00019891 gpsm1,LOC106910217 coding downstream 242138 2211677 ~ 2212773 (-)
AMCG00019890 LOC107731024,LOC108423692,LOC107665022,LOC108255392,LOC107595531 coding downstream 269716 2160178 ~ 2185195 (-)
AMCG00019889 NA coding downstream 318972 2105830 ~ 2135939 (-)
AMCG00019888 brinp1,LOC107597955,LOC106563266 coding downstream 534156 1913441 ~ 1920755 (-)
AMCG00019913 NA coding upstream 209103 2689902 ~ 2690317 (-)
AMCG00019914 NA coding upstream 224530 2705329 ~ 2705778 (-)
AMCG00019912 NA coding upstream 229163 2709962 ~ 2742168 (-)
AMCG00019911 rab14,Rab14,LOC105889591,LOC101069277,LOC107566859,LOC103390174,LOC103045876,LOC108259986 coding upstream 291770 2772569 ~ 2781304 (-)
AMCG00019919 stom,LOC103154398,LOC103473970,LOC102236904,LOC108278899 coding upstream 330552 2811351 ~ 2825112 (-)
G59485 NA non-coding downstream 233717 2195803 ~ 2221194 (-)
G59484 NA non-coding downstream 262364 2192334 ~ 2192547 (-)
G59414 NA non-coding downstream 792732 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 960938 1493686 ~ 1493973 (-)
G59396 NA non-coding downstream 1057686 1389345 ~ 1397225 (-)
G59556 NA non-coding upstream 94005 2574804 ~ 2575670 (-)
G59810 NA non-coding upstream 1009919 3490718 ~ 3491049 (-)
G59825 ttll11,LOC107579646 non-coding upstream 1116406 3597205 ~ 3597760 (-)
G59827 NA non-coding upstream 1159239 3640038 ~ 3642114 (-)
G59826 NA non-coding upstream 1165240 3646039 ~ 3647334 (-)
G59505 NA other downstream 127496 2324288 ~ 2327415 (-)
G59408 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 other downstream 868911 1584919 ~ 1586000 (-)
AMCG00019880 NA other downstream 1882084 535831 ~ 572827 (-)
G59545 NA other upstream 14100 2494899 ~ 2507020 (-)
G59712 NA other upstream 551057 3031856 ~ 3034335 (-)
G59720 NA other upstream 627002 3107801 ~ 3111347 (-)
AMCG00019942 NA other upstream 685438 3166237 ~ 3185965 (-)
G59806 NA other upstream 998983 3479782 ~ 3480109 (-)

Expression


Co-expression Network