G59556


Basic Information

Item Value
gene id G59556
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 2574804 ~ 2575670 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74466
ggCCCTTTCTAGCCCCCCGTTCCGAAGCCTGTTTGTCCTTCAGAGTCACTTAAACTTCTCCAGCGGTGAAACAGGAACGAACGGGAGCTCTCTGCGCAAAAGCCTCGAACAAAAAGCACGAAATTACATTGCCAAGGGTTTTATTCCGCTTTATTCCCGAAAATATTAATTGAACCCCCCCCATCTCCTCAAAGACCCTCTatccaccacccccccccaccacacacacacaaacacactttgcACACAATTCGATCCTAGGACCCCCAAGGATCGGTGATACAGGTTTGCGTAAGTAATTTCAATCTTGAATTAGATCGAGCACAATTAACGGCGTGGATACAAAACATGAGACAGAGGAGGCGAAGGGGGGGCGATGTGCTGCAATTTGAGTCGTCTCCTCAGTGCTGGGAGTCGGCCCTCTGTAATCGGTGGTATTCTTTCAGCctTTGCTTGCAAGTGGGGACAAATGAAGGGGACTCTCCACAAGACAACCAGGGGGGTCTTTCTAGCGATCCCTGCTAttgcttcaaaacaaaaacggCGTCAGAAAAAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74466 True 558 lncRNA 0.50 2 2574804 2575670

Neighbor

gene id symbol gene type direction distance location
AMCG00019899 NA coding downstream 95095 2463636 ~ 2479709 (-)
AMCG00019892 gpsm1,LOC106563264 coding downstream 327644 2226804 ~ 2247160 (-)
AMCG00019891 gpsm1,LOC106910217 coding downstream 362031 2211677 ~ 2212773 (-)
AMCG00019890 LOC107731024,LOC108423692,LOC107665022,LOC108255392,LOC107595531 coding downstream 389609 2160178 ~ 2185195 (-)
AMCG00019889 NA coding downstream 438865 2105830 ~ 2135939 (-)
AMCG00019913 NA coding upstream 114232 2689902 ~ 2690317 (-)
AMCG00019914 NA coding upstream 129659 2705329 ~ 2705778 (-)
AMCG00019912 NA coding upstream 134292 2709962 ~ 2742168 (-)
AMCG00019911 rab14,Rab14,LOC105889591,LOC101069277,LOC107566859,LOC103390174,LOC103045876,LOC108259986 coding upstream 196899 2772569 ~ 2781304 (-)
AMCG00019919 stom,LOC103154398,LOC103473970,LOC102236904,LOC108278899 coding upstream 235681 2811351 ~ 2825112 (-)
G59485 NA non-coding downstream 353610 2195803 ~ 2221194 (-)
G59484 NA non-coding downstream 382257 2192334 ~ 2192547 (-)
G59414 NA non-coding downstream 912625 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 1080831 1493686 ~ 1493973 (-)
G59396 NA non-coding downstream 1177579 1389345 ~ 1397225 (-)
G59810 NA non-coding upstream 915048 3490718 ~ 3491049 (-)
G59825 ttll11,LOC107579646 non-coding upstream 1021535 3597205 ~ 3597760 (-)
G59827 NA non-coding upstream 1064368 3640038 ~ 3642114 (-)
G59826 NA non-coding upstream 1070369 3646039 ~ 3647334 (-)
G59852 NA non-coding upstream 1095353 3671023 ~ 3675014 (-)
G59545 NA other downstream 67784 2494899 ~ 2507020 (-)
G59530 NA other downstream 94005 2454911 ~ 2480799 (-)
G59505 NA other downstream 247389 2324288 ~ 2327415 (-)
G59408 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 other downstream 988804 1584919 ~ 1586000 (-)
AMCG00019880 NA other downstream 2001977 535831 ~ 572827 (-)
G59712 NA other upstream 456186 3031856 ~ 3034335 (-)
G59720 NA other upstream 532131 3107801 ~ 3111347 (-)
AMCG00019942 NA other upstream 590567 3166237 ~ 3185965 (-)
G59806 NA other upstream 904112 3479782 ~ 3480109 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 2436774 5012444 ~ 5061512 (-)

Expression


Co-expression Network