G59720


Basic Information

Item Value
gene id G59720
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3107801 ~ 3111347 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74676
gtgtatttttttagattaatattAAACCAATACACTAATGAacagtattaaaatgtgtgctgtACCCACACCCACACGGAGCCCTGGTTCCGCCCCGCATCATGCCAGAGCCACTGCCAGTAACTCACCTACTTCTTCCACCAGCCCACAACCGCTACTCCGACCGAGAGGGCACAGGGACTGCCATCCACACTTTGCACAGCCGCACTGCCGGGGCTACAGTACAGACGGCTAATCCCAATTAAAAGCGGCGTTTGTTCTCTTTCCTTCCAATCACAGAAGGACAGCTATGGAGGGGCTGTGACACGAGAGATCCTCGGCCGGGAATTCCCCTCCGTGTCCGGTAAACGAGCAGGCAGAGATCGCTCCGCTGCTTTCCGGGCAGGCTGTCAAGCGAGTGGGCACACTTCCATCAGAACTGTTATAAAAGATGTTGTTAGTCCAGTTTATGATCATATGAATTTGACCCGGTGCAGTAGCTGCTACGCTAGCACTGGTCAGGGGCGGTGTGTACCTGACTAGATGACACTATTATTATATCAGGTACCAGTTATTACCCAATGCTACACACTGAAATGCAGTAATGTTTGTGCCTTGTAAGTCCAGCAGGAACCTCTTTTCAACACGAGAGAGCAAGCATTTTTCAGACGGTATTTTCTGTAATGTGTTCCCACTCTGCATGAGTTAGTGTCGCTGGATGTTTGGCATTCGATGATGACGCTGGATTGTTACTTGTCGTACAAATAGAACATTTACTACATCCGATAATACGGGTGAGGGTCGGCGTGGCCTTCGCTGGTGGAGGGTTGGGTCAGCCTCCTGTGGAGCTGGTGATTGTGTTGAACACTAGAAGGAATGAATTTAAAAGTCATGGGAGCTGCTATAGCGCGTAGCTCAGAGATGGGAAAGAAAGATTGgttttattggattttttttgttttggtgtgctTGTATATACgttgccttttaaaaaataatgaactgtCTGTGTAGGTGCAGGTCACGCACTTGGCCTATGCACACGGCTGTATCACGGGAACTGCTCCGTGGGGTTAAGCAATGATGTAACTATACCATTGAGAACACAGAGGACAAACCATCCAGAGGAAGACTGAGCAGTTTGGCACCGTTGTGTAGCACGGCCTGCCCGCGCATGCAGGGCATCATGGGCGCTCACGGTGGCCACGTCGGCGCACGCTCAGGATTACGGTCTGTGTCCATGTCGGTGTGTTCGACTGCTCCCCAGAACACGGCTTTTTGCCTTACAGGAAAGGCAAGGACCCCagatctttgtgttttttcccattCATACCAGCTGAGCTACGCAGTCCTAGAAGACATTTCAAGAATCACATAGTCTTAGTTACTGATAGGCTATTGGATGATTGCCTTTCCTTGTGTGCAATGTAGTTTAGTTTCAGGGGTTATAGGcttggggggtgggagggttTAAGCAGGGATATCCGTGAACTCGGCAGTGATGTAGAGATTGTTGGGGTGAATGGGAGCGACAGGAACACGGTCGCGGGAGCTGAAAAGCagtgagactctgctctgtccCTCTGAAGGTGTGGGGTCTCTGTCCCCGAGCAAACTGCCCTGATGTTGGGAGGCAATACTGGACGgctgtttttccattaataCTCCAGCTGTTCAGTTAATACCTTTTGAAAGCAAACCAGAGTGGGAAACACGACTGGGCTCAAATATCCCCAGTTCATAGCCAGCCGTAGAAAGGATTGCACATTTCTCTAAACAGGTCAGTGATGTCACGGCAGAGGCATCGATCGGGACAGCAGAGGTGTTACCACTCGAACCTGGGGGTGCGGCCGCGTCtcctccgtgtgtgtgtgtgtgtgttcggtCTTAATGCTGGGTGTACCGCAGTGCATCTCTTTCCACATGTGGATCGGCtgccaattattatttttattttcgaTATAATCAGCTGCATCGGAATGTTCCCCCTCGACAGCCATGGAAAACAATCGCAGGCCAATAAAACCTCTCGTCATAAACTATCAGAGCCCCACCCCGCACAGATGTCTGGCTCCTATTATCGAGCAGCTGGAGCGGCGAGGAGGAGGCAGCCGCTCTGTGTTCGTTGTGTGGATCTTTACGGCCTGCGGCATTTTCCACTCACCGCCACTCACTCAGAGAAGCCAGGGATGGGTTTTGAAATAGTGGACACCTTACCCTCCGTCCCAGGGAGACGAGTTTTTAAAGTGGCCCCTGGTGTAGAAGGAAAGAATCTGTGAATGCATTAACAGTGTTGTTAACTTGCTATATTGTttcacttttagttttttgcatgtcacgtttttatttaaattattcattctAGCCATTACCATGctttcttgattttatttattaaccgTATCCTCATTTTCAAGTTGCATTGATCGCATAGGCATAGCTCAGCAGGGCCACTTAACCCACATGATAGGAAAGAGTGTCAGTGTGAATTAGTTtcaatttgtatgtatattaaagatggatttgtattacatttacatttcagaaaactgttgtattattatgtgGCGTCTTTTAGCCAATGAAAACAATTCAGAAATGGGTTCCTTCTCTGTTAGGGGCACCTTTTAAACTCCGGATTCAAAATGTCCTGGGAAAATGGGTCTAAGAGGCATCCCTGTGAAGGACGACCATGGGATGTCAAAAGCATTTTGGGGGGGGATTGTGTCGGGGCATTTTATCGTGATTCACTGTTGTAAATCTGGAGATATGGACCTCCCAGTACCAGTTAGGGCCAGTCTGAGCCCGGTCACGTTGCACGGTTTGACTGATTGATGGGACAGTAATGGGGTGTAATTAGCAGAAGGCACCAAACGATGAGCTAACACTGAAGGGAGCTTCTTCTcttaaacacaacacagctttATAAAGATAGGTATTGAGGGTTTGCTTAACGTGATGAGATGTCCCCGTCTAAGAAAGAGGCTCATAGCATTTGAAAGCTTACACCCAAGCTTGAAGAGACTCAGGCTCGTACTAACATGGAGACCATTCATTgatcttttcttgttttggtaTTTTCCTTGGTATAATGTATTCCTATTTCTTAAAGGAGACTGTTAGACAATGCAAGACCAGCTcctgctttgtatttttaaaactatctGGAAGTATTTGTGAATCTCATctcggttttgtttttataattatccGTATATCATCTATCAAATCCTTGGCCTGCGTTCGAAGGCAGAGCTGGAATATGTGTGAGGAGGAGGCCACGGCAGCTGGTCCAGAGGAGTGGAAAACTGAAGTGGTTCTTCTAAAAGGAGTGGAAGCAGCCACACGCTTTGCTCTAACACAAACTGTGCTCTTAAACTCATGCGATTTATTTTGTGTCTCGGTTCTTTTgacttgtgtctgtgtgtgtgtgagtgttgtgtgCCCATTTCTTGGATTTTGTTTGCATGtctatactgttttatataggTAGCCGTAGACCTTAGTACTGGAAATCtcaatgtttttacatttgtttgcaaatacacaataaatattataataaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74676 True 3547 TUCP 0.46 1 3107801 3111347

Neighbor

gene id symbol gene type direction distance location
AMCG00019928 rgl4,ralgds,LOC105909371,LOC106562829,LOC107694528 coding downstream 53294 3034391 ~ 3054507 (-)
AMCG00019927 NA coding downstream 117931 2970844 ~ 2989870 (-)
AMCG00019922 NA coding downstream 165166 2921041 ~ 2942635 (-)
AMCG00019923 NA coding downstream 198428 2884280 ~ 2909373 (-)
AMCG00019918 NA coding downstream 274395 2826323 ~ 2833406 (-)
AMCG00019933 tbc1d13,LOC106562828,LOC106570453 coding upstream 748 3112095 ~ 3129430 (-)
AMCG00019939 zgc:101748,LOC107705992,LOC107661555,LOC107675763,LOC107737178,LOC107599407 coding upstream 46937 3158284 ~ 3165762 (-)
AMCG00019940 NA coding upstream 77310 3188657 ~ 3190995 (-)
AMCG00019943 NA coding upstream 83430 3194777 ~ 3201209 (-)
AMCG00019941 cunh9orf78,LOC107093874 coding upstream 96540 3207887 ~ 3211163 (-)
G59556 NA non-coding downstream 532131 2574804 ~ 2575670 (-)
G59485 NA non-coding downstream 886607 2195803 ~ 2221194 (-)
G59484 NA non-coding downstream 915254 2192334 ~ 2192547 (-)
G59414 NA non-coding downstream 1445622 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 1613828 1493686 ~ 1493973 (-)
G59810 NA non-coding upstream 379371 3490718 ~ 3491049 (-)
G59825 ttll11,LOC107579646 non-coding upstream 485858 3597205 ~ 3597760 (-)
G59827 NA non-coding upstream 528691 3640038 ~ 3642114 (-)
G59826 NA non-coding upstream 534692 3646039 ~ 3647334 (-)
G59852 NA non-coding upstream 559676 3671023 ~ 3675014 (-)
G59712 NA other downstream 73466 3031856 ~ 3034335 (-)
G59545 NA other downstream 600781 2494899 ~ 2507020 (-)
G59530 NA other downstream 627002 2454911 ~ 2480799 (-)
G59505 NA other downstream 780386 2324288 ~ 2327415 (-)
G59408 LOC107374630,LOC108230875,LOC104924185,LOC105913012,LOC101063574 other downstream 1521801 1584919 ~ 1586000 (-)
AMCG00019942 NA other upstream 54890 3166237 ~ 3185965 (-)
G59806 NA other upstream 368435 3479782 ~ 3480109 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 1901097 5012444 ~ 5061512 (-)
G60118 NA other upstream 2152567 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 2165315 5276662 ~ 5278291 (-)

Expression


Co-expression Network