G59810


Basic Information

Item Value
gene id G59810
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3490718 ~ 3491049 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74817
TTCTCTGCGATTGTCAGATCGAAAAAAGCCTTTTTAATGAGGACAGCGCAAAATAAATGCTAAGTTGAACTAGAACTGCGATTGCTACTGCTTGTTGCGAACTAGGTGTATAGGTCTGCATCTGAAGAAATTACAAGAATAATTAATGGAGACATGGTCAAGACtttgctatttgttttgtttttattagtatgcactgcagtataaatattttcttaagtTTAATTGTGGGTTCACTTTCAACTGTAAACATAACTATCCACACATATGTATTAAGTCTTACATAACTGTTTTGCTGCTAGTCCTTATTTTCCAATGAGCGTTTGTTTAAC

Function

GO:

id name namespace
GO:0031290 retinal ganglion cell axon guidance biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74817 True 332 lncRNA 0.34 1 3490718 3491049

Neighbor

gene id symbol gene type direction distance location
AMCG00019944 NA coding downstream 111121 3340802 ~ 3379597 (-)
AMCG00019945 garnl3,LOC102797662 coding downstream 162967 3323779 ~ 3327751 (-)
AMCG00019938 prrx1 coding downstream 232881 3255212 ~ 3257837 (-)
AMCG00019941 cunh9orf78,LOC107093874 coding downstream 279555 3207887 ~ 3211163 (-)
AMCG00019943 NA coding downstream 289509 3194777 ~ 3201209 (-)
AMCG00019947 NA coding upstream 5227 3496276 ~ 3497746 (-)
AMCG00019946 NA coding upstream 32239 3523288 ~ 3529636 (-)
AMCG00019950 NA coding upstream 184058 3675107 ~ 3706097 (-)
AMCG00019949 LOC107599025,LOC107725315 coding upstream 231846 3722895 ~ 3728526 (-)
AMCG00019952 phf19,LOC106580128,LOC106585785,LOC107557185 coding upstream 615948 4106997 ~ 4133823 (-)
G59556 NA non-coding downstream 915048 2574804 ~ 2575670 (-)
G59485 NA non-coding downstream 1269524 2195803 ~ 2221194 (-)
G59484 NA non-coding downstream 1298171 2192334 ~ 2192547 (-)
G59414 NA non-coding downstream 1828539 1605102 ~ 1662179 (-)
G59403 NA non-coding downstream 1996745 1493686 ~ 1493973 (-)
G59825 ttll11,LOC107579646 non-coding upstream 106156 3597205 ~ 3597760 (-)
G59827 NA non-coding upstream 148989 3640038 ~ 3642114 (-)
G59826 NA non-coding upstream 154990 3646039 ~ 3647334 (-)
G59852 NA non-coding upstream 179974 3671023 ~ 3675014 (-)
G59853 NA non-coding upstream 289849 3780898 ~ 3796706 (-)
G59806 NA other downstream 10609 3479782 ~ 3480109 (-)
AMCG00019942 NA other downstream 304753 3166237 ~ 3185965 (-)
G59720 NA other downstream 379371 3107801 ~ 3111347 (-)
G59712 NA other downstream 456383 3031856 ~ 3034335 (-)
G59545 NA other downstream 983698 2494899 ~ 2507020 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 1521395 5012444 ~ 5061512 (-)
G60118 NA other upstream 1772865 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 1785613 5276662 ~ 5278291 (-)
AMCG00019992 NA other upstream 1800541 5291590 ~ 5292673 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other upstream 2668528 6159577 ~ 6172474 (-)

Expression


Co-expression Network