G59853


Basic Information

Item Value
gene id G59853
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 3780898 ~ 3796706 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU74866
GCTGTGACTAGTGCttggttttttatttattttaaatgcatgtgtattCATAGGtagatttatttctttaaatcctTCTCTTCGTCCCTACCTCCATACAGGGGTTTTTAAGCAGAAGGCTAAAGGGATCCATCAAAAGGACAAAGAGCCAGCCCAAACTCGACAGAAACAGCAGCTTCCGGCACATTCTCCCTGGCTTCAGGAGCGTGGACAATGAGAGGGGAGCTGTGGtctcacacacagcagagacaATTCGCTGATCTGAATATCCAACTGCAGCCTTAATCATTTACACGACGACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74866 True 303 lncRNA 0.45 2 3780898 3796706

Neighbor

gene id symbol gene type direction distance location
AMCG00019949 LOC107599025,LOC107725315 coding downstream 52372 3722895 ~ 3728526 (-)
AMCG00019950 NA coding downstream 74801 3675107 ~ 3706097 (-)
AMCG00019946 NA coding downstream 251262 3523288 ~ 3529636 (-)
AMCG00019947 NA coding downstream 283152 3496276 ~ 3497746 (-)
AMCG00019944 NA coding downstream 401301 3340802 ~ 3379597 (-)
AMCG00019952 phf19,LOC106580128,LOC106585785,LOC107557185 coding upstream 310291 4106997 ~ 4133823 (-)
AMCG00019953 NA coding upstream 346284 4142990 ~ 4164282 (-)
AMCG00019954 NA coding upstream 368093 4164799 ~ 4172609 (-)
AMCG00019955 si:dkeyp-51b7.3,fibcd1,LOC106585783,LOC107665003,LOC107598982,LOC107725318 coding upstream 388599 4185305 ~ 4195180 (-)
AMCG00019956 fibcd1,LOC105015243,LOC108428067,LOC107574583,LOC107596897 coding upstream 458566 4255272 ~ 4263577 (-)
G59852 NA non-coding downstream 105884 3671023 ~ 3675014 (-)
G59826 NA non-coding downstream 133564 3646039 ~ 3647334 (-)
G59827 NA non-coding downstream 138784 3640038 ~ 3642114 (-)
G59825 ttll11,LOC107579646 non-coding downstream 183138 3597205 ~ 3597760 (-)
G59810 NA non-coding downstream 289849 3490718 ~ 3491049 (-)
G59862 NA non-coding upstream 242809 4039515 ~ 4039918 (-)
G59880 NA non-coding upstream 298644 4095350 ~ 4095984 (-)
G59907 NA non-coding upstream 511970 4308676 ~ 4308945 (-)
G59922 NA non-coding upstream 825271 4621977 ~ 4622357 (-)
G59932 NA non-coding upstream 851316 4648022 ~ 4651002 (-)
G59806 NA other downstream 300789 3479782 ~ 3480109 (-)
AMCG00019942 NA other downstream 594933 3166237 ~ 3185965 (-)
G59720 NA other downstream 669551 3107801 ~ 3111347 (-)
G59712 NA other downstream 746563 3031856 ~ 3034335 (-)
G59545 NA other downstream 1273878 2494899 ~ 2507020 (-)
AMCG00019976 fam102a,LOC105891604,LOC108430372,LOC103389177 other upstream 1215738 5012444 ~ 5061512 (-)
G60118 NA other upstream 1467208 5263914 ~ 5265925 (-)
AMCG00019993 NA other upstream 1479956 5276662 ~ 5278291 (-)
AMCG00019992 NA other upstream 1494884 5291590 ~ 5292673 (-)
AMCG00020002 edf1,LOC106563255,LOC105015108,LOC100194632 other upstream 2362871 6159577 ~ 6172474 (-)

Expression


Co-expression Network